March 2022 Commit Log

Number of Commits:
140
Number of Active Developers:
2
sbu062 2022-03-31 12:21 Rev.: 12320

doc: fix merge example script

7 lines of code changed in 1 file:

sbu062 2022-03-31 12:19 Rev.: 12319

fix save output arrays in batch script, more help on rate output arrays

8 lines of code changed in 2 files:

sbu062 2022-03-31 10:27 Rev.: 12318

tools go to scripts "directory"

118 lines of code changed in 4 files:

sbu062 2022-03-30 18:30 Rev.: 12317

doc: merge from origin

1 lines of code changed in 1 file:

sbu062 2022-03-30 18:29 Rev.: 12316

reformat only

1 lines of code changed in 1 file:

sbu062 2022-03-30 18:18 Rev.: 12315

doc: sensitivity analysis batch script, needs a separate copy for example doc (appendix)

142 lines of code changed in 3 files:

sbu062 2022-03-30 18:13 Rev.: 12314

save also output stats for each simulation run

10 lines of code changed in 1 file:

sbu062 2022-03-30 12:28 Rev.: 12313

doc: use tag

18 lines of code changed in 1 file:

sbu062 2022-03-30 12:20 Rev.: 12312

doc: more info on batch operation

10 lines of code changed in 2 files:

sbu062 2022-03-30 12:05 Rev.: 12311

doc: document batch mode

52 lines of code changed in 1 file:

sbu062 2022-03-30 11:20 Rev.: 12310

comments only

3 lines of code changed in 1 file:

sbu062 2022-03-30 11:12 Rev.: 12309

doc: appendix 2 is fishmet command script with usage; appendix tags do not need numbered to avoid wrong reference errors tagging in main text

46 lines of code changed in 3 files:

sbu062 2022-03-30 10:41 Rev.: 12308

add more plot reusing file suffix

6 lines of code changed in 1 file:

sbu062 2022-03-30 10:27 Rev.: 12307

delete extraneous spaces
isee PRP8 https://peps.python.org/pep-0008/#whitespace-in-expressions-and-statements

2 lines of code changed in 1 file:

sbu062 2022-03-30 10:23 Rev.: 12306

added full reference for (stomach_volume)

8 lines of code changed in 1 file:

sbu062 2022-03-30 09:44 Rev.: 12305

fix params to agree with dictionary names

3 lines of code changed in 1 file:

sbu062 2022-03-30 09:29 Rev.: 12304

more useful explicit parameters in graphic file name, not loop numbers

3 lines of code changed in 1 file:

sbu062 2022-03-29 13:47 Rev.: 12303

silent mode illogical, use only batch

6 lines of code changed in 3 files:

sbu062 2022-03-29 10:55 Rev.: 12302

batch mode (`--batch`) forces CMD mode, no GUI

10 lines of code changed in 4 files:

sbu062 2022-03-29 09:29 Rev.: 12301

doc: batch mode

9 lines of code changed in 1 file:

sbu062 2022-03-29 08:30 Rev.: 12300

fix `output stats` must invoke all counters

3 lines of code changed in 1 file:

sbu062 2022-03-29 08:13 Rev.: 12299

add svn revision

5 lines of code changed in 1 file:

sbu062 2022-03-29 08:03 Rev.: 12298

added tags

2 lines of code changed in 1 file:

sbu062 2022-03-28 14:28 Rev.: 12297

added batch silent mode without command prompt, with `NoPrompt` global var

20 lines of code changed in 3 files:

sbu062 2022-03-28 14:05 Rev.: 12296

add output plot

3 lines of code changed in 1 file:

sbu062 2022-03-28 13:58 Rev.: 12295

temperature range

1 lines of code changed in 1 file:

sbu062 2022-03-28 12:23 Rev.: 12294

add script header with generation date and time

8 lines of code changed in 1 file:

sbu062 2022-03-28 12:07 Rev.: 12293

add food input rate `food_input_rate` parameter loop

26 lines of code changed in 1 file:

sbu062 2022-03-28 11:44 Rev.: 12292

better index variable

8 lines of code changed in 1 file:

sbu062 2022-03-28 10:59 Rev.: 12291

format only

1 lines of code changed in 1 file:

sbu062 2022-03-28 10:57 Rev.: 12290

delete obsolete code

1 lines of code changed in 1 file:

sbu062 2022-03-25 16:43 Rev.: 12289

comments on dictionary

8 lines of code changed in 1 file:

sbu062 2022-03-25 13:10 Rev.: 12288

(model_output_stats_row_csv) also saves body_mass

40 lines of code changed in 1 file:

sbu062 2022-03-25 12:18 Rev.: 12287

comment

1 lines of code changed in 1 file:

sbu062 2022-03-25 11:53 Rev.: 12286

both midgut and stomach are linked to body_mass array

1 lines of code changed in 1 file:

sbu062 2022-03-25 11:48 Rev.: 12285

reformat

12 lines of code changed in 1 file:

sbu062 2022-03-25 11:43 Rev.: 12284

basic constants uppercase

4 lines of code changed in 1 file:

sbu062 2022-03-25 11:42 Rev.: 12283

reuse (stomach_volume)

1 lines of code changed in 1 file:

sbu062 2022-03-25 11:33 Rev.: 12282

comment fix only

1 lines of code changed in 1 file:

sbu062 2022-03-25 11:32 Rev.: 12281

use single tab spacings

20 lines of code changed in 1 file:

sbu062 2022-03-25 11:30 Rev.: 12280

use functional notation for (stomach_volume)

1 lines of code changed in 1 file:

sbu062 2022-03-25 11:28 Rev.: 12279

use of dictionary is better readability, functional lambda functions for capacity transformatio

11 lines of code changed in 1 file:

sbu062 2022-03-25 11:09 Rev.: 12278

start using dictionary for parameters

27 lines of code changed in 1 file:

sbu062 2022-03-25 10:37 Rev.: 12277

test dictionary structure for parameters

9 lines of code changed in 1 file:

sbu062 2022-03-24 22:03 Rev.: 12276

small reformat

6 lines of code changed in 1 file:

sbu062 2022-03-24 21:16 Rev.: 12275

more spaced grid for temperature

1 lines of code changed in 1 file:

sbu062 2022-03-24 21:10 Rev.: 12274

added output stats

18 lines of code changed in 1 file:

sbu062 2022-03-24 20:10 Rev.: 12273

fix term

12 lines of code changed in 1 file:

sbu062 2022-03-24 19:20 Rev.: 12272

small fix

13 lines of code changed in 1 file:

sbu062 2022-03-24 15:46 Rev.: 12271

istart scrip output, for standard output

14 lines of code changed in 1 file:

sbu062 2022-03-24 15:23 Rev.: 12270

need body mass smaller array

1 lines of code changed in 1 file:

sbu062 2022-03-24 14:37 Rev.: 12269

stomach and midgut capacity grid

21 lines of code changed in 1 file:

sbu062 2022-03-24 13:16 Rev.: 12268

function for midgut capacity

10 lines of code changed in 1 file:

sbu062 2022-03-24 13:11 Rev.: 12267

functions for calculating stomach capacity

28 lines of code changed in 1 file:

sbu062 2022-03-24 11:49 Rev.: 12266

doc: no more volume ml as of e.g. r11508

2 lines of code changed in 1 file:

sbu062 2022-03-24 11:45 Rev.: 12265

started filling parameters

20 lines of code changed in 1 file:

sbu062 2022-03-24 11:29 Rev.: 12264

need a script to generate fishmet batch job

1 lines of code changed in 1 file:

sbu062 2022-03-21 12:32 Rev.: 12263

cronies

60 lines of code changed in 1 file:

sbu062 2022-03-19 11:56 Rev.: 12262

wording

24 lines of code changed in 1 file:

sbu062 2022-03-19 11:44 Rev.: 12261

wording

12 lines of code changed in 1 file:

sbu062 2022-03-19 11:42 Rev.: 12260

better rephrases

77 lines of code changed in 1 file:

sbu062 2022-03-19 11:32 Rev.: 12259

small fix

12 lines of code changed in 1 file:

sbu062 2022-03-19 11:32 Rev.: 12258

bold only

71 lines of code changed in 1 file:

sbu062 2022-03-19 11:31 Rev.: 12257

small add escalation

22 lines of code changed in 1 file:

sbu062 2022-03-18 23:50 Rev.: 12256

small addition

12 lines of code changed in 1 file:

sbu062 2022-03-18 20:14 Rev.: 12255

add link

9 lines of code changed in 1 file:

sbu062 2022-03-18 20:11 Rev.: 12254

typo

12 lines of code changed in 1 file:

sbu062 2022-03-18 17:49 Rev.: 12253

small fix

41 lines of code changed in 1 file:

sbu062 2022-03-18 13:23 Rev.: 12252

substitute magical numbers with parameter

10 lines of code changed in 1 file:

sbu062 2022-03-18 12:20 Rev.: 12251

reformat

1 lines of code changed in 1 file:

sbu062 2022-03-18 12:19 Rev.: 12250

delete unused `GET_CUMULATE` block for alternative calculation of `food_mass_absorb_cumulate` for cross-checking

2 lines of code changed in 1 file:

sbu062 2022-03-18 08:53 Rev.: 12249

delete some unused variables

4 lines of code changed in 3 files:

sbu062 2022-03-17 22:44 Rev.: 12248

bold

9 lines of code changed in 1 file:

sbu062 2022-03-17 21:29 Rev.: 12247

small fix

12 lines of code changed in 1 file:

sbu062 2022-03-17 21:20

small fix

28 lines of code changed in 2 files:

sbu062 2022-03-17 13:18 Rev.: 12244

small fix

48 lines of code changed in 1 file:

sbu062 2022-03-17 13:16 Rev.: 12243

ending

57 lines of code changed in 1 file:

sbu062 2022-03-17 09:52 Rev.: 12242

add link to trap

75 lines of code changed in 1 file:

sbu062 2022-03-17 09:32 Rev.: 12241

rename files for medium

17069 lines of code changed in 4 files:

sbu062 2022-03-17 09:31 Rev.: 12240

add Medium url and image, for pdf export

16289 lines of code changed in 2 files:

sbu062 2022-03-17 09:12 Rev.: 12239

small fix at end

12 lines of code changed in 1 file:

sbu062 2022-03-17 09:10 Rev.: 12238

small fixes, few

19 lines of code changed in 1 file:

sbu062 2022-03-17 01:47 Rev.: 12237

small fix

12 lines of code changed in 1 file:

sbu062 2022-03-17 01:43

typo

47 lines of code changed in 2 files:

sbu062 2022-03-17 01:35

small fix

21 lines of code changed in 2 files:

sbu062 2022-03-17 01:33 Rev.: 12232

small typo fix

12 lines of code changed in 1 file:

sbu062 2022-03-17 01:28

small fix

18 lines of code changed in 2 files:

sbu062 2022-03-17 01:26 Rev.: 12229

title modified

5 lines of code changed in 1 file:

sbu062 2022-03-17 01:25 Rev.: 12228

title

28 lines of code changed in 1 file:

sbu062 2022-03-17 01:17 Rev.: 12227

reread and done, to publish

71 lines of code changed in 1 file:

sbu062 2022-03-17 00:48 Rev.: 12226

first full draft

74 lines of code changed in 1 file:

sbu062 2022-03-16 22:04 Rev.: 12225

start first draft

25 lines of code changed in 1 file:

sbu062 2022-03-16 21:57 Rev.: 12224

a new short text

38 lines of code changed in 1 file:

hje044 2022-03-15 12:29 Rev.: 12223

R script can now handle NA values, allowing me to load in runs that crashed prior to finishing

13 lines of code changed in 2 files:

sbu062 2022-03-11 11:53 Rev.: 12222

added images of jg and sb

2240 lines of code changed in 1 file:

sbu062 2022-03-11 11:51 Rev.: 12221

adde images participants or authors

0 lines of code changed in 2 files:

hje044 2022-03-11 08:09 Rev.: 12220

Added option for increasing temperature over the years, and generalised parameters for stochastic deviance in inheritance and phenotypic plasticity.

273 lines of code changed in 2 files:

sbu062 2022-03-10 12:44 Rev.: 12219

small adjust p5

31 lines of code changed in 1 file:

sbu062 2022-03-10 12:38 Rev.: 12218

notes: five freedoms (p2)

2229 lines of code changed in 1 file:

sbu062 2022-03-10 11:32 Rev.: 12217

deleted reentrant slide

2304 lines of code changed in 1 file:

sbu062 2022-03-09 09:37 Rev.: 12216

some initial changes after Jarl comments

4113 lines of code changed in 1 file:

sbu062 2022-03-09 09:29 Rev.: 12215

new image, screenshot codeblocks

0 lines of code changed in 1 file:

sbu062 2022-03-08 15:35 Rev.: 12214

complex image better in png

0 lines of code changed in 1 file:

sbu062 2022-03-08 15:29 Rev.: 12213

use latex via svn p13

4455 lines of code changed in 1 file:

sbu062 2022-03-08 15:21 Rev.: 12212

fix symbol format p13

1971 lines of code changed in 1 file:

sbu062 2022-03-08 15:17 Rev.: 12211

15 pages done

9773 lines of code changed in 1 file:

sbu062 2022-03-08 14:38 Rev.: 12210

more image

62 lines of code changed in 3 files:

sbu062 2022-03-08 13:44 Rev.: 12209

predictibve decisions image

3934 lines of code changed in 1 file:

sbu062 2022-03-08 13:44 Rev.: 12208

add images

1282 lines of code changed in 3 files:

sbu062 2022-03-08 13:38 Rev.: 12207

add allostasis

2268 lines of code changed in 1 file:

sbu062 2022-03-08 12:39 Rev.: 12206

flip fish psycho image

205 lines of code changed in 1 file:

sbu062 2022-03-08 12:10 Rev.: 12205

added pic from balchen

68 lines of code changed in 1 file:

sbu062 2022-03-08 12:08 Rev.: 12204

added pics

0 lines of code changed in 4 files:

sbu062 2022-03-08 11:45 Rev.: 12203

added jaguar sofa images

110 lines of code changed in 1 file:

sbu062 2022-03-07 14:56 Rev.: 12202

added fish psycho image

158 lines of code changed in 1 file:

sbu062 2022-03-07 14:54 Rev.: 12201

fish psycho image

0 lines of code changed in 1 file:

sbu062 2022-03-07 14:37 Rev.: 12200

definitions

90 lines of code changed in 1 file:

sbu062 2022-03-07 13:38 Rev.: 12199

upper bar added to avoid white edges

64 lines of code changed in 1 file:

sbu062 2022-03-07 13:35 Rev.: 12198

add linked image with transparency

11678 lines of code changed in 1 file:

sbu062 2022-03-07 13:22 Rev.: 12197

added image for nora presentation, background

0 lines of code changed in 1 file:

sbu062 2022-03-07 11:18 Rev.: 12196

Use TREE citation for medium

44 lines of code changed in 1 file:

sbu062 2022-03-04 13:18 Rev.: 12195

added autor name

14 lines of code changed in 1 file:

sbu062 2022-03-04 12:56 Rev.: 12194

Jarl's changes
> From: Jarl Giske <Jarl.Giske@uib.no>
> To: Sergei Budaev <Sergey.Budaev@uib.no>
> Subject: RE: unrelated article
> Date: Fri, 4 Mar 2022 12:29:58 +0000

> Yes, go for it! Send it first to The Guardian, and some days later to På Høyden.
> Some comments attached.

36 lines of code changed in 1 file:

sbu062 2022-03-04 12:22 Rev.: 12193

7 pages is enough for 10-15 min

146 lines of code changed in 1 file:

sbu062 2022-03-04 12:16 Rev.: 12192

basic template with title page

171 lines of code changed in 1 file:

sbu062 2022-03-04 12:15 Rev.: 12191

was misplaced

2179 lines of code changed in 2 files:

sbu062 2022-03-04 12:14 Rev.: 12190

presentation rtemplate for NORA startup

0 lines of code changed in 1 file:

sbu062 2022-03-04 11:54 Rev.: 12189

more or less ready

45 lines of code changed in 1 file:

sbu062 2022-03-04 09:01 Rev.: 12188

more small changes

18 lines of code changed in 1 file:

sbu062 2022-03-04 08:56 Rev.: 12187

refs numbered, Nature style

50 lines of code changed in 1 file:

sbu062 2022-03-04 08:54 Rev.: 12186

more text added

31 lines of code changed in 1 file:

sbu062 2022-03-04 01:43 Rev.: 12185

a few changes

40 lines of code changed in 1 file:

sbu062 2022-03-04 01:32 Rev.: 12184

done most of the article

90 lines of code changed in 1 file:

sbu062 2022-03-03 13:40 Rev.: 12183

started article

12 lines of code changed in 1 file:

sbu062 2022-03-03 13:14 Rev.: 12182

started short paper

25 lines of code changed in 1 file:

sbu062 2022-03-03 11:42 Rev.: 12181

explicitly declare `impure` procedures

21 lines of code changed in 1 file:

sbu062 2022-03-03 11:20 Rev.: 12180

rearrange subroutines: moved all internal from inside (cmd_iface_process_commands)i, needed a few iterator variables `i` defined

1015 lines of code changed in 1 file:

sbu062 2022-03-02 10:27 Rev.: 12179

fix commenst only

1 lines of code changed in 1 file:

sbu062 2022-03-01 10:00 Rev.: 12178

DEBUG: calculate total (amr) energy for calibration and comparison

8 lines of code changed in 1 file:

sbu062 2022-03-01 09:41 Rev.: 12177

need unit for amr

1 lines of code changed in 1 file:

February 2022 »

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