December 2016 Commit Log

Number of Commits:
264
Number of Active Developers:
4
cje012 2016-12-27 12:14 Rev.: 2351

Removed mrank as it is now obsolete after deleting rank().

6 lines of code changed in 1 file:

cje012 2016-12-27 11:58 Rev.: 2350

Found a bug and squashed it

1 lines of code changed in 1 file:

cje012 2016-12-27 11:57 Rev.: 2349

Removed some old comments that were not relevant anymore

0 lines of code changed in 1 file:

cje012 2016-12-27 11:54 Rev.: 2348

Changed binary into unformatted.

4 lines of code changed in 1 file:

sbu062 2016-12-24 05:25 Rev.: 2347

changelog update

15 lines of code changed in 1 file:

sbu062 2016-12-24 05:19 Rev.: 2346

added parameter undef_ret_null to (average) function to return zero with zero sample size for counts, fixed zero start array index in (..._get_mean_...) memory stack functions, HIST_SIZE-last_here+1:HIST_SIZE

44 lines of code changed in 1 file:

sbu062 2016-12-23 15:43 Rev.: 2345

fix calculate mean with zero n, function (average)

48 lines of code changed in 1 file:

sbu062 2016-12-23 11:08 Rev.: 2344

debug code for (eat_food_item), environment reduced [00 deleted from plane coords] [debug in ln. 17252]

9 lines of code changed in 1 file:

sbu062 2016-12-23 10:55 Rev.: 2343

small, reformat code

24 lines of code changed in 1 file:

sbu062 2016-12-22 18:51 Rev.: 2342

changed the code to a portable implementation using form='unformatted'; this should be used from now on

24 lines of code changed in 1 file:

sbu062 2016-12-22 14:55 Rev.: 2341

changelog updated

12 lines of code changed in 1 file:

sbu062 2016-12-22 14:51 Rev.: 2340

had to declare csv_file_here as fixed string in debug plot subroutines as a workaround logger output file halting

23 lines of code changed in 1 file:

sbu062 2016-12-22 14:26 Rev.: 2339

deleted references to csv_file here to avoid conflict with derived type name in CSV_IO

23 lines of code changed in 1 file:

sbu062 2016-12-22 12:27 Rev.: 2338

moved (file_delete) after (debug_interpolate_plot_save) for convenience/consistency

49 lines of code changed in 1 file:

cje012 2016-12-22 11:21 Rev.: 2337

Added information about how to add svn tags to files. Thank you so much Sergey!

12 lines of code changed in 1 file:

cje012 2016-12-22 10:58 Rev.: 2336

Trying to add svn tags to the Hormones_v2.f90 file

5 lines of code changed in 1 file:

sbu062 2016-12-22 10:03 Rev.: 2335

now added a line with $Id ... $ at the start of the file. this line will from now on auto-update on each commit and show the version number, date of the last commit and who did it. this is a very useful functionality. When such a variable is declared in the code:

character(len=*), parameter, public :: SVN_VERSION_STRING = "$Revision: 2332 $"

it will keep the revision tag that could be printed in outputs to make it clear what exactly model version has generated it.

1 lines of code changed in 1 file:

sbu062 2016-12-22 09:59 Rev.: 2334

added a set of subversion keywords to the binary write module. This is donelike this:
testingbranch]$ svn propset svn:keywords "Id Date Revision HeadURL LastChangedDate" binary_write.f90
keywords allow updating information within the file itself, e.g. set revision number or other information, see first lines of the module file for $Id tag. It is possible to set a string variable constant to an automatically updated svn tag and then the program itself will know its own revision number.

1 lines of code changed in 1 file:

sbu062 2016-12-22 09:55 Rev.: 2333

added optional unit number in binary_write.f90, now the fortran unit number to use within the subroutines can be specified as a (an optional) parameter, although it is not necessary. this required adding two integer variables, an additional dummy parameter for the subroutine funit and local file unit to keep the number inside, funit_loc.

23 lines of code changed in 1 file:

sbu062 2016-12-21 15:58 Rev.: 2332

save histograms of food item depth at start

10 lines of code changed in 1 file:

sbu062 2016-12-21 15:48 Rev.: 2331

small reformat

4 lines of code changed in 1 file:

sbu062 2016-12-21 15:32 Rev.: 2330

changelog updated

11 lines of code changed in 1 file:

sbu062 2016-12-21 15:26 Rev.: 2329

fixed magical log file rupture: deleted extra logging. NOTE: logger module sometimes does not tolerate allocatable strings or many allocatable strings.

10 lines of code changed in 1 file:

cje012 2016-12-21 14:45 Rev.: 2328

More Christmas cleaning and made it easier to print on any computer

7 lines of code changed in 1 file:

sbu062 2016-12-21 13:52 Rev.: 2327

"Removed_using_TkSVN"

0 lines of code changed in 1 file:

cje012 2016-12-21 13:11 Rev.: 2326

Added the printing module to the main program temporarly. Thank you so much Sergey!

75 lines of code changed in 1 file:

cje012 2016-12-21 13:10 Rev.: 2325

Wrote a new subroutine for printing 4D integar arrays, and updated the style to fit the main program

49 lines of code changed in 1 file:

sbu062 2016-12-21 11:33 Rev.: 2324

fixed rank

3 lines of code changed in 1 file:

sbu062 2016-12-21 11:17 Rev.: 2323

added initial implementation for a module writing binary files, WORKS ONLY with intel fortran, NON-PORTABLE

51 lines of code changed in 1 file:

cje012 2016-12-21 10:20 Rev.: 2322

Some christmas cleaning of the code, and started on a new printing sub routine

277 lines of code changed in 1 file:

sbu062 2016-12-21 09:38 Rev.: 2321

fixed units and depth

30 lines of code changed in 1 file:

sbu062 2016-12-20 17:36 Rev.: 2320

check for zero irradiance in (visual_range_scalar)

7 lines of code changed in 1 file:

sbu062 2016-12-20 17:31 Rev.: 2319

check for zero irradiance

7 lines of code changed in 1 file:

sbu062 2016-12-20 17:19 Rev.: 2318

minor change, include irradianceto file name

5 lines of code changed in 1 file:

cje012 2016-12-20 15:09 Rev.: 2317

Adjusted to plot properly

63 lines of code changed in 1 file:

cje012 2016-12-20 14:42 Rev.: 2316

Replaced my file with Jacquelines file

22 lines of code changed in 1 file:

jwe041 2016-12-20 14:37 Rev.: 2315

new code for reserves / writing reserves to ind-matrix

22 lines of code changed in 1 file:

sbu062 2016-12-20 14:12 Rev.: 2314

more predators in both habitats, minor fix debug code, visual range reporting for predator

5 lines of code changed in 1 file:

sbu062 2016-12-20 13:04 Rev.: 2313

merged from branch

799 lines of code changed in 4 files:

sbu062 2016-12-20 13:01

changelog updated

41 lines of code changed in 2 files:

sbu062 2016-12-20 13:00 Rev.: 2310

HRP precision model is now Q_PREC_128, use HRP in visual range procedures, overflow value now limited by fixed ceiling based on maximum overflow-free value calculated by (visrange_plot.f90), a safe ceiling for non-whales, plus added a couple required HRP generic functions for unit conversion

43 lines of code changed in 1 file:

cje012 2016-12-20 12:37 Rev.: 2309

Added file for plotting figures in R

55 lines of code changed in 1 file:

sbu062 2016-12-20 12:28 Rev.: 2308

solved crashes in (deriv), now using full Q_PREC_128 for HRP real precision, deleted code to plot visual range for different fish size, it is now separate visrange_plot in tools

7 lines of code changed in 1 file:

sbu062 2016-12-20 12:09 Rev.: 2307

manual output device

4 lines of code changed in 1 file:

sbu062 2016-12-20 12:03 Rev.: 2306

implemented TOSTR for real kind 16

113 lines of code changed in 2 files:

sbu062 2016-12-20 11:45 Rev.: 2305

code formatting only

1 lines of code changed in 1 file:

sbu062 2016-12-20 11:39 Rev.: 2304

minor fixes, plus saving now raw data CSV output, works fine with Oracle f95 quirks

16 lines of code changed in 1 file:

sbu062 2016-12-20 11:21 Rev.: 2303

small changes, converted units cm, Oracle f95 doesn't tolerate MAX_LOG in (deriv)

14 lines of code changed in 1 file:

cje012 2016-12-20 09:14 Rev.: 2302

Replaced my testing branch with the code from Jacquelines testing branch

257 lines of code changed in 1 file:

sbu062 2016-12-20 08:48 Rev.: 2301

restored -r 2297

2 lines of code changed in 1 file:

sbu062 2016-12-20 08:41 Rev.: 2300

restored r421 inadvertently commited

0 lines of code changed in 1 file:

sbu062 2016-12-20 08:33 Rev.: 2299

minor change

3 lines of code changed in 3 files:

sbu062 2016-12-20 08:18 Rev.: 2298

added visual range program in 128 bit

17 lines of code changed in 1 file:

sbu062 2016-12-19 16:55 Rev.: 2297

added visual range debug plot

29 lines of code changed in 1 file:

sbu062 2016-12-19 16:06 Rev.: 2296

environment and habitat sizes increased by the factor of 10, comments on measurement units in visual range

16 lines of code changed in 1 file:

sbu062 2016-12-19 15:47 Rev.: 2295

debug code block with visual range for predators

20 lines of code changed in 1 file:

sbu062 2016-12-19 15:15 Rev.: 2294

debug code for perception objects

24 lines of code changed in 1 file:

sbu062 2016-12-19 14:59 Rev.: 2293

deleted obsolete debug code in (GENERATIONS_LOOP_GA)

18 lines of code changed in 1 file:

sbu062 2016-12-19 14:11 Rev.: 2292

updated changelog, probably the (deriv) FPU errors are finally gone, hopefully

20 lines of code changed in 1 file:

sbu062 2016-12-19 14:05 Rev.: 2291

finally deleted deprecated (deriv_r4), +small comments on IEEE in (deriv)

2 lines of code changed in 1 file:

sbu062 2016-12-19 13:57 Rev.: 2290

more comments on (deriv)

8 lines of code changed in 1 file:

sbu062 2016-12-19 13:50 Rev.: 2289

still had to transfer the MAX_LOG safe exponentiation limit from (deriv_r4) to (deriv ) in HSP precision, precision alone is not enough to prevent overflows +Infinity, still needs additional safeguards. Note HUGE_REAL constant is referenced to S_PREC_32, huge() 32 bit maximum value.

31 lines of code changed in 1 file:

sbu062 2016-12-19 13:08 Rev.: 2288

in (visual_range_scalar): interpediate variable visual_range_HRP_here with explicit conversion to HRP visual_range_calculate

21 lines of code changed in 1 file:

sbu062 2016-12-19 12:45 Rev.: 2287

reorganised visual range subroutines, add HRP real kind for high precision, use it in the whole backend

38 lines of code changed in 1 file:

jwe041 2016-12-19 10:47 Rev.: 2286

redesigned forward simulation

subroutine for saving to binary files

206 lines of code changed in 1 file:

sbu062 2016-12-19 10:36 Rev.: 2285

added save histogram (debug_histogram_save)

90 lines of code changed in 1 file:

sbu062 2016-12-19 09:30 Rev.: 2284

strict MODNAME and PROCNAME rules: must be same case as the procedure and in parentheses ...= "(the_procedure)"

38 lines of code changed in 1 file:

sbu062 2016-12-18 13:26 Rev.: 2283

merged from branch

5 lines of code changed in 1 file:

sbu062 2016-12-18 09:50 Rev.: 2282

description of parameters in (CSV_MATRIX_READ)

5 lines of code changed in 1 file:

sbu062 2016-12-17 19:26 Rev.: 2281

changelog update

16 lines of code changed in 1 file:

sbu062 2016-12-17 19:19 Rev.: 2280

fixed parameter constant precision

1 lines of code changed in 1 file:

sbu062 2016-12-17 19:12 Rev.: 2279

probably finallym solved (deriv) FPU errors. Now added r8 version (deriv_r8), the older version (r4) deprecated; added generic interface so far

55 lines of code changed in 1 file:

sbu062 2016-12-17 17:20 Rev.: 2278

in (predator_perception_is_seeing_predators) fixed partial indexing issue, now with small N of spatial objects use full indexing, index_max_size substitutes PRED_SELECT_ITEMS_INDEX_PARTIAL parameter inside. Also partially fixed (workaround!!) FPU arithmetic errors in (deriv), still returns wrong huge negative values of visual range, but they are substituted by approxmate based on (easyr).

95 lines of code changed in 1 file:

sbu062 2016-12-17 06:42 Rev.: 2277

debug code added invokation of (see_pred)

2 lines of code changed in 1 file:

sbu062 2016-12-17 06:01 Rev.: 2276

merged latest from branch

31 lines of code changed in 3 files:

sbu062 2016-12-16 21:45 Rev.: 2275

changelog updated

69 lines of code changed in 2 files:

sbu062 2016-12-16 21:36 Rev.: 2274

added screenshot of pgplot_font environ var

1 lines of code changed in 1 file:

sbu062 2016-12-16 21:32 Rev.: 2273

added pgplot set font screenshot on Windows

0 lines of code changed in 1 file:

sbu062 2016-12-16 20:52 Rev.: 2272

merged from branch, fixed csv with quotes

18 lines of code changed in 2 files:

sbu062 2016-12-16 18:51 Rev.: 2271

stripe away quotes when reading CSV, fixed wrong reads

13 lines of code changed in 1 file:

sbu062 2016-12-16 18:50 Rev.: 2270

ignore quotes in (IS_NUMERIC) when include_blank is TRUE, needed for correct treatment of quotes in csv read

5 lines of code changed in 1 file:

sbu062 2016-12-16 16:32 Rev.: 2269

merged from branch, added hthist

336 lines of code changed in 4 files:

sbu062 2016-12-16 16:30 Rev.: 2268

added hthist to doc

8 lines of code changed in 1 file:

sbu062 2016-12-16 16:16 Rev.: 2267

set keywords on hthist

3 lines of code changed in 1 file:

sbu062 2016-12-16 16:14 Rev.: 2266

histogram tool added to makefile

1 lines of code changed in 1 file:

sbu062 2016-12-16 16:13 Rev.: 2265

fix help screen

1 lines of code changed in 1 file:

sbu062 2016-12-16 16:10 Rev.: 2264

added utility to do histogram: hthist

310 lines of code changed in 1 file:

sbu062 2016-12-16 14:25 Rev.: 2263

added debug plots for predator distribution at start

12 lines of code changed in 1 file:

sbu062 2016-12-16 14:06 Rev.: 2262

(predator_make_init) now does not set label, is elemental. separate label set subroutine (predator_label_set)

20 lines of code changed in 1 file:

sbu062 2016-12-16 13:49 Rev.: 2261

predator object, added body size. deterministic, all predators equal for simplicity, plus accessor functions (get_size) and (get_risk)

40 lines of code changed in 1 file:

sbu062 2016-12-16 13:27 Rev.: 2260

named parameters for predators init function in (habitat_make_init)

9 lines of code changed in 1 file:

sbu062 2016-12-16 13:13 Rev.: 2259

debug code only, add perception objects functions to live one by one

11 lines of code changed in 1 file:

sbu062 2016-12-16 12:41 Rev.: 2258

debugging (percept_memory_food_get_mean_n), hist_size-1 to avoid zero array start index

2 lines of code changed in 1 file:

sbu062 2016-12-16 10:50 Rev.: 2257

added platform-specific checks for non installed external commands

20 lines of code changed in 2 files:

sbu062 2016-12-16 10:21 Rev.: 2256

added platform-specific WHICH_CMD to check for non-installed tools, on Windows uses where (>=Win7)

7 lines of code changed in 3 files:

nzlcj 2016-12-16 10:13 Rev.: 2255

Looked at code together, specified homework.

21 lines of code changed in 1 file:

jwe041 2016-12-16 09:04 Rev.: 2254

reduced ind-matrix

58 lines of code changed in 1 file:

sbu062 2016-12-16 08:47 Rev.: 2253

included ifort and f95 in list for checking presence in path

1 lines of code changed in 1 file:

sbu062 2016-12-15 16:08 Rev.: 2252

returned r 2246, deleted later erroneous commit when we debugged together

130 lines of code changed in 1 file:

sbu062 2016-12-15 13:29 Rev.: 2251

exit code output in (call_external), (log_check_external) for logging the status of external binary progs

34 lines of code changed in 1 file:

sbu062 2016-12-15 13:08 Rev.: 2250

merged from branch, minimum character set to 1 now

2 lines of code changed in 1 file:

sbu062 2016-12-15 13:01 Rev.: 2249

set minimum field to one MIN_FIELD to correctly treat all zero lines like 0,0,0,0,0,0,0,0,0,0,0

2 lines of code changed in 1 file:

sbu062 2016-12-15 11:54 Rev.: 2248

another merge from branch, small change

20 lines of code changed in 1 file:

sbu062 2016-12-15 11:53 Rev.: 2247

building plot tools

165 lines of code changed in 2 files:

cje012 2016-12-15 11:49 Rev.: 2246

Did a mistake and removed the file, adding it svn again

179 lines of code changed in 1 file:

sbu062 2016-12-15 11:45 Rev.: 2245

merged work branch

172 lines of code changed in 6 files:

cje012 2016-12-15 10:21 Rev.: 2244

Copying the hormones_v2.f90 file to my branch

0 lines of code changed in 1 file:

sbu062 2016-12-15 08:32 Rev.: 2243

use (check_external) in (system_init) now, test external plotting procs

10 lines of code changed in 1 file:

sbu062 2016-12-15 07:47 Rev.: 2242

(check_externa) to check exit status, not reliable

21 lines of code changed in 1 file:

sbu062 2016-12-14 19:28 Rev.: 2241

deleted IMPLICIT NONE in the local scope, taints oracle f95

2 lines of code changed in 1 file:

sbu062 2016-12-14 17:22 Rev.: 2240

additional logging in (debug_scatterplot_save)

7 lines of code changed in 1 file:

sbu062 2016-12-14 15:54 Rev.: 2239

enabled fast math on oracle f95 for graphic progs

4 lines of code changed in 1 file:

sbu062 2016-12-14 15:32 Rev.: 2238

changelog update

8 lines of code changed in 1 file:

jwe041 2016-12-14 14:45 Rev.: 2237

added random number & Individual Loop

121 lines of code changed in 1 file:

sbu062 2016-12-14 14:30 Rev.: 2236

forgotten targets phony

3 lines of code changed in 1 file:

sbu062 2016-12-14 14:25 Rev.: 2235

debug make flag now forces to run the model code in the DEBUG mode, sets IS_DEBUG via command line option

7 lines of code changed in 1 file:

sbu062 2016-12-14 14:23 Rev.: 2234

adapted makefiles for easy build of binary / plotting tools

41 lines of code changed in 2 files:

sbu062 2016-12-14 12:22 Rev.: 2233

minor fix doc on plots

18 lines of code changed in 1 file:

sbu062 2016-12-13 19:26 Rev.: 2232

minor fix and changelog

35 lines of code changed in 4 files:

sbu062 2016-12-13 19:00 Rev.: 2231

updated doc on plots

22 lines of code changed in 1 file:

sbu062 2016-12-13 18:49 Rev.: 2230

added grfont.dat PGPLOT file from GrWin

0 lines of code changed in 1 file:

sbu062 2016-12-13 17:02 Rev.: 2229

fixed string util name, command line parameter shows ugly on Windows

3 lines of code changed in 1 file:

sbu062 2016-12-13 16:50 Rev.: 2228

small fix

12 lines of code changed in 1 file:

jwe041 2016-12-13 14:50 Rev.: 2227

removed test matrix
added forward simulation

142 lines of code changed in 1 file:

sbu062 2016-12-13 14:29 Rev.: 2226

added plotting tools to doc

46 lines of code changed in 1 file:

sbu062 2016-12-13 13:46 Rev.: 2225

merged tools from branch

71 lines of code changed in 2 files:

sbu062 2016-12-13 13:45 Rev.: 2224

added svn revision information

9 lines of code changed in 2 files:

sbu062 2016-12-13 13:37 Rev.: 2223

added svn rev parameter

2 lines of code changed in 1 file:

sbu062 2016-12-13 13:35 Rev.: 2222

reformatted PGPLOT instructions for clarity

60 lines of code changed in 2 files:

sbu062 2016-12-13 12:33 Rev.: 2221

fixes of (debug_scatterplot_save) and (file_delete), debug plots for habitat, food item distribution, works okay, set MMDD global tag, makefile fixed cleandata to delete also plots

70 lines of code changed in 2 files:

sbu062 2016-12-13 10:33 Rev.: 2220

additional checks in (file_delete)

6 lines of code changed in 1 file:

sbu062 2016-12-13 10:15 Rev.: 2219

small fix (debug_scatterplot_save)

1 lines of code changed in 1 file:

sbu062 2016-12-13 10:10 Rev.: 2218

done (debug_scatterplot_save) and (file_delete)

103 lines of code changed in 1 file:

sbu062 2016-12-13 06:11 Rev.: 2217

changelog update

17 lines of code changed in 1 file:

sbu062 2016-12-12 20:35 Rev.: 2216

updated latest merged, ht scatterplot utility

608 lines of code changed in 3 files:

sbu062 2016-12-12 20:22 Rev.: 2215

minor fix

3 lines of code changed in 1 file:

sbu062 2016-12-12 20:12 Rev.: 2214

minor fix wrong type

1 lines of code changed in 1 file:

sbu062 2016-12-12 20:09 Rev.: 2213

EXEC_SCATTERPLOT parameter

5 lines of code changed in 1 file:

sbu062 2016-12-12 18:45 Rev.: 2212

minor fix

17 lines of code changed in 1 file:

sbu062 2016-12-12 16:01 Rev.: 2211

renamed interpolate to htintrpl

2 lines of code changed in 1 file:

sbu062 2016-12-12 15:57 Rev.: 2210

disabled debug

1 lines of code changed in 1 file:

sbu062 2016-12-12 15:54 Rev.: 2209

makefile fixed names

2 lines of code changed in 1 file:

sbu062 2016-12-12 15:54 Rev.: 2208

renamed interpolate.f90 to htintrpl.f90, all HEDTOOLS utils start with ht

349 lines of code changed in 1 file:

sbu062 2016-12-12 15:50 Rev.: 2207

keywords on scatterplot program

2 lines of code changed in 1 file:

sbu062 2016-12-12 15:49 Rev.: 2206

added tool prog to plot scatterplot

248 lines of code changed in 1 file:

sbu062 2016-12-12 12:10 Rev.: 2205

merged latest makefile, nulldevice for platforms

7 lines of code changed in 1 file:

sbu062 2016-12-12 12:07 Rev.: 2204

platform-specific null device for redirecting unneeded outputs

7 lines of code changed in 1 file:

jwe041 2016-12-12 11:30 Rev.: 2203

copy for my testing

180 lines of code changed in 1 file:

sbu062 2016-12-12 10:43 Rev.: 2202

merged from branch

26 lines of code changed in 3 files:

sbu062 2016-12-12 10:31 Rev.: 2201

using array constructor in column names

22 lines of code changed in 1 file:

nzlcj 2016-12-12 10:15 Rev.: 2200

Coded together - changed aerobic scope to equation 9 from Claireaux et al. 2000. Conversions for energy units seem to be correct now.

2 lines of code changed in 1 file:

sbu062 2016-12-11 21:48 Rev.: 2195

fixed comments in makefiles

6 lines of code changed in 3 files:

sbu062 2016-12-11 20:21 Rev.: 2194

changelog merged

12 lines of code changed in 1 file:

sbu062 2016-12-11 20:20 Rev.: 2193

changelog update

1 lines of code changed in 1 file:

sbu062 2016-12-11 11:16 Rev.: 2192

update changelog

11 lines of code changed in 1 file:

sbu062 2016-12-11 09:27 Rev.: 2191

updated merged latest changes from branch, incl. (csv_matrix_read)

882 lines of code changed in 9 files:

sbu062 2016-12-11 09:20 Rev.: 2190

updated doc to include (CSV_MATRIX_READ), also updated (CSV_FILE_LINES_COUNT) - interface changed!!

137 lines of code changed in 1 file:

sbu062 2016-12-11 09:17 Rev.: 2189

implemented real kind 8 of (CSV_MATRIX_READ_R8) and generic interface (CSV_MATRIX_READ)

210 lines of code changed in 1 file:

sbu062 2016-12-10 17:20 Rev.: 2188

added minus and E in (is_numeric) to fix read errors with random negative data and very small values

4 lines of code changed in 1 file:

sbu062 2016-12-10 15:43 Rev.: 2187

updated makefile from template

14 lines of code changed in 1 file:

sbu062 2016-12-10 13:32

changelog update

17 lines of code changed in 2 files:

sbu062 2016-12-10 13:31 Rev.: 2184

deleted precision_str

1 lines of code changed in 1 file:

sbu062 2016-12-10 13:27 Rev.: 2183

updated makefile, deleted precision_str

1 lines of code changed in 1 file:

sbu062 2016-12-10 13:25 Rev.: 2182

deleted module precision_str in BASE_STRINGS, params moved to main module

14 lines of code changed in 2 files:

sbu062 2016-12-10 10:00 Rev.: 2181

updated makefile from the model code after the latest changes: csv depends on strings.

15 lines of code changed in 1 file:

sbu062 2016-12-10 09:56 Rev.: 2180

changelog updated

61 lines of code changed in 1 file:

sbu062 2016-12-10 09:41 Rev.: 2179

minor fix header comments on (CSV_MATRIX_READ_R4)

7 lines of code changed in 1 file:

sbu062 2016-12-10 09:35 Rev.: 2178

minor fix header comments on (CSV_MATRIX_READ_R4)

2 lines of code changed in 1 file:

sbu062 2016-12-10 09:33 Rev.: 2177

fixed header comments, code beautified

15 lines of code changed in 1 file:

sbu062 2016-12-10 09:24 Rev.: 2176

(CSV_MATRIX_READ_R4) now works correctly with tabs and incomplete data. Deleted all debug code and outputs, may still need more testing on big random data files, if ok, still missing kind=8 version and generic interface

20 lines of code changed in 1 file:

sbu062 2016-12-10 08:57 Rev.: 2175

(IS_NUMERIC) with optional include-blanks flag now also includes TAB (ascii 9)

5 lines of code changed in 1 file:

sbu062 2016-12-09 22:34 Rev.: 2174

minor change comments and debug

5 lines of code changed in 1 file:

sbu062 2016-12-09 22:30 Rev.: 2173

fixed second case missing, need more testing

63 lines of code changed in 1 file:

sbu062 2016-12-09 20:48 Rev.: 2172

fixed reading incomplete records

17 lines of code changed in 1 file:

sbu062 2016-12-09 18:44 Rev.: 2171

first working version of (CSV_MATRIX_READ_R4)

101 lines of code changed in 1 file:

sbu062 2016-12-09 18:43 Rev.: 2170

in (is_numeric), added option to include spaces

29 lines of code changed in 1 file:

sbu062 2016-12-09 16:54 Rev.: 2169

implemented function (is_numeric)

29 lines of code changed in 1 file:

sbu062 2016-12-09 15:56 Rev.: 2168

the module CSV_IO now depends on BASE_STRINGS, changed makefile to include the strings module prior to CSV_IO

23 lines of code changed in 2 files:

sbu062 2016-12-09 15:20 Rev.: 2167

need (value) from STRINGS

179 lines of code changed in 1 file:

sbu062 2016-12-09 12:13 Rev.: 2166

placed private copy of (parse) along with dependants (split), (removebksl) and (compact) procedures for later use in CSV read, corrected implicit variables and parameters

223 lines of code changed in 2 files:

sbu062 2016-12-09 11:40 Rev.: 2165

small change comments

52 lines of code changed in 2 files:

sbu062 2016-12-09 10:16 Rev.: 2164

minor comments fix on debug mode

6 lines of code changed in 1 file:

sbu062 2016-12-09 10:09 Rev.: 2163

in (system_init) first check environment variable then command line parameter

11 lines of code changed in 1 file:

sbu062 2016-12-09 10:05 Rev.: 2162

implemented (system_init) that reads environment variable or command line parameters for setting IS_DEBUG, IS_DEBUG is now protected-attribute variable, (LOGGER_INIT) now called from (system_init), additional log output in behaviour execute.

62 lines of code changed in 1 file:

sbu062 2016-12-08 14:49 Rev.: 2161

work on prototyped for behaviour class, procs (behaviour_select_food_item), (behaviour_select_food_item_nearest), (behaviour_do_eat_food_item

70 lines of code changed in 1 file:

sbu062 2016-12-08 12:19 Rev.: 2160

now use stderr for errors, useISO_FORTRAN_ENV

4 lines of code changed in 1 file:

sbu062 2016-12-08 12:03 Rev.: 2159

1. fix (call_external) windows null-device share violation; 2. added parameter food id parameter in perception object in (behaviour_do_eat_food_item)

19 lines of code changed in 1 file:

sbu062 2016-12-08 10:44 Rev.: 2158

starting prototypes for behaviour class, procs (behaviour_select_food_item), (behaviour_select_food_item_nearest), (behaviour_do_eat_food_item)

42 lines of code changed in 1 file:

sbu062 2016-12-08 09:39 Rev.: 2157

log compiler version and options in (logger_init)

10 lines of code changed in 1 file:

sbu062 2016-12-08 08:40 Rev.: 2156

minor, rename parameter

8 lines of code changed in 1 file:

sbu062 2016-12-08 05:46 Rev.: 2155

minor comments fix

8 lines of code changed in 1 file:

sbu062 2016-12-08 05:43 Rev.: 2154

changelog updated

9 lines of code changed in 1 file:

sbu062 2016-12-08 05:39 Rev.: 2153

implemented optional parameter for background execution of external child task in (call_external)

27 lines of code changed in 1 file:

sbu062 2016-12-08 05:09 Rev.: 2152

long HeadURL deleted

0 lines of code changed in 1 file:

sbu062 2016-12-07 18:34 Rev.: 2151

added exit codes

6 lines of code changed in 1 file:

sbu062 2016-12-07 16:47 Rev.: 2150

added option to save interpolation plots even in non-debug mode in (debug_interpolate_plot_save)

18 lines of code changed in 1 file:

sbu062 2016-12-07 15:53 Rev.: 2149

small comments and todo

6 lines of code changed in 1 file:

sbu062 2016-12-07 15:44 Rev.: 2148

changelog updated

38 lines of code changed in 1 file:

sbu062 2016-12-07 15:42 Rev.: 2147

now using (debug_interpolate_plot_save) in (food_item_capture_probability_calc), the mechanism to save debug interpolation plots is now ready:)

8 lines of code changed in 1 file:

sbu062 2016-12-07 15:32 Rev.: 2146

done saving debug interpolation plots in (gos_find_global_state)

11 lines of code changed in 1 file:

sbu062 2016-12-07 15:22 Rev.: 2145

(debug_interpolate_plot_save) is now global proc

42 lines of code changed in 1 file:

sbu062 2016-12-07 15:13 Rev.: 2144

seperate subroutine for saving debug interpolation plots (debug_interpolate_plot_save), so far within (gos_find_global_state)

61 lines of code changed in 1 file:

sbu062 2016-12-07 14:19 Rev.: 2143

minor fix comments

4 lines of code changed in 1 file:

sbu062 2016-12-07 14:06 Rev.: 2142

flexible wrapper to call external commands (call_external), debug plots now produced using (call_external)

110 lines of code changed in 1 file:

sbu062 2016-12-07 12:17 Rev.: 2141

added .hpplot (HPGL2) support

9 lines of code changed in 1 file:

sbu062 2016-12-07 11:57 Rev.: 2140

delete graphics files on distclean

1 lines of code changed in 1 file:

sbu062 2016-12-07 11:55 Rev.: 2139

added notes on reduced non-interactive device support under Windows (GrWin)

7 lines of code changed in 1 file:

sbu062 2016-12-07 10:56 Rev.: 2138

added support for additional graphic formats gif, hpgl

16 lines of code changed in 1 file:

sbu062 2016-12-07 10:30 Rev.: 2137

minor fix help screen

1 lines of code changed in 1 file:

sbu062 2016-12-07 10:28 Rev.: 2136

added output file format selection by extension .ps .png

22 lines of code changed in 1 file:

sbu062 2016-12-07 09:51 Rev.: 2135

notes on windows build

10 lines of code changed in 1 file:

sbu062 2016-12-06 15:46 Rev.: 2134

minor fix

2 lines of code changed in 1 file:

sbu062 2016-12-06 15:26 Rev.: 2133

screenshot of interpolate

0 lines of code changed in 1 file:

sbu062 2016-12-06 15:05 Rev.: 2132

minor fix comments

9 lines of code changed in 2 files:

sbu062 2016-12-06 14:51 Rev.: 2131

merged latest change, build Windows

878 lines of code changed in 5 files:

sbu062 2016-12-06 14:49 Rev.: 2130

set svn keywords

11 lines of code changed in 1 file:

sbu062 2016-12-06 14:39 Rev.: 2129

implemented GrWin build on MS Windows with graphic output using /GW device, added comments on Windows build

31 lines of code changed in 1 file:

sbu062 2016-12-06 13:24 Rev.: 2128

small fixes tools

4 lines of code changed in 2 files:

sbu062 2016-12-06 13:21 Rev.: 2127

added makefile

566 lines of code changed in 1 file:

sbu062 2016-12-06 13:20 Rev.: 2126

moved interpolation code to tools

6 lines of code changed in 2 files:

sbu062 2016-12-06 12:50 Rev.: 2124

detecting runtime platform with (PLATFORM_IS_WINDOWS)

20 lines of code changed in 1 file:

sbu062 2016-12-06 12:34 Rev.: 2123

changeloge updated

20 lines of code changed in 1 file:

sbu062 2016-12-06 12:31 Rev.: 2122

merged from branch

343 lines of code changed in 5 files:

sbu062 2016-12-06 12:28 Rev.: 2121

implemented platform detection func. (PLATFORM_IS_WINDOWS)

51 lines of code changed in 2 files:

sbu062 2016-12-06 11:28 Rev.: 2120

fix comments on debug plot

8 lines of code changed in 1 file:

sbu062 2016-12-06 10:54 Rev.: 2119

debug plots for interpoplation data in (capture_probability) using the (interpolate) program done yesterday, see HEDTOOLS/templates for its code

31 lines of code changed in 1 file:

sbu062 2016-12-06 10:03 Rev.: 2118

addad Lagrange interpolation

23 lines of code changed in 1 file:

sbu062 2016-12-06 09:21 Rev.: 2117

various fixed to interpolation (done mainly in the bus)

28 lines of code changed in 2 files:

sbu062 2016-12-05 20:07 Rev.: 2116

more flexible output parameters (e.g. png) for the interpolation program

23 lines of code changed in 1 file:

sbu062 2016-12-05 19:26 Rev.: 2115

deleted obsolete code

0 lines of code changed in 1 file:

sbu062 2016-12-05 18:25 Rev.: 2114

small fixes

13 lines of code changed in 1 file:

sbu062 2016-12-05 16:48 Rev.: 2113

small fix added quotes

17 lines of code changed in 1 file:

sbu062 2016-12-05 16:21 Rev.: 2112

command line plotting program for producing interpolation debug plots, fixed makefile for strings module call

214 lines of code changed in 2 files:

sbu062 2016-12-05 11:36 Rev.: 2111

additional check, minor

10 lines of code changed in 1 file:

sbu062 2016-12-05 10:55 Rev.: 2110

minor reformat

4 lines of code changed in 1 file:

sbu062 2016-12-05 10:53 Rev.: 2109

minor fix comments

5 lines of code changed in 1 file:

sbu062 2016-12-05 10:47 Rev.: 2108

(parse_svn_version) moved up level to commondata, SVN_Version now global variable

32 lines of code changed in 1 file:

sbu062 2016-12-03 12:14 Rev.: 2107

update changelog

14 lines of code changed in 1 file:

sbu062 2016-12-03 12:09 Rev.: 2106

minor fix case rules

5 lines of code changed in 1 file:

sbu062 2016-12-03 12:08 Rev.: 2105

minor fix label length

1 lines of code changed in 1 file:

sbu062 2016-12-03 11:43 Rev.: 2104

changelog updated

14 lines of code changed in 1 file:

sbu062 2016-12-03 11:41 Rev.: 2103

deleted distance_food_item from (execute) method as the objective values now compute automatically

1 lines of code changed in 1 file:

sbu062 2016-12-03 11:31 Rev.: 2102

reorderedoptional fake parameters in (do_this) and (expectancies_calculate) according to precedence order

12 lines of code changed in 1 file:

sbu062 2016-12-03 10:46 Rev.: 2101

optional capture probability in (expectancies_calculate) plus comments

41 lines of code changed in 1 file:

sbu062 2016-12-03 10:21 Rev.: 2100

fix optional parameters in (do_this) for EAT_FOOD class: use the provided distance to food item in calculating capture probability

1 lines of code changed in 1 file:

sbu062 2016-12-03 00:01 Rev.: 2099

small comments only changed

11 lines of code changed in 1 file:

sbu062 2016-12-02 17:49 Rev.: 2098

added CamelCase global vars in code formatting rules

10 lines of code changed in 1 file:

sbu062 2016-12-02 17:40 Rev.: 2097

changelog updated

19 lines of code changed in 1 file:

sbu062 2016-12-02 17:38 Rev.: 2096

checked the implemented global dynamic parameter Time_Step_Model_Current in procedures, where it was dummy parameter, converted to optional to override global, TODO: still need to check how reliably it passes across procedures in the different modules

57 lines of code changed in 1 file:

sbu062 2016-12-02 17:11 Rev.: 2095

had to added Time_Step_Model_Current as a global dynamic parameter

9 lines of code changed in 1 file:

sbu062 2016-12-02 16:57 Rev.: 2094

more fix comments (intent)

2 lines of code changed in 1 file:

sbu062 2016-12-02 16:57 Rev.: 2093

fix comments

5 lines of code changed in 1 file:

sbu062 2016-12-02 16:52 Rev.: 2092

fixed comments

17 lines of code changed in 1 file:

sbu062 2016-12-02 16:34 Rev.: 2091

implemented (capture_probability) for the food item object depending on the distance between the predator agent and the food item

199 lines of code changed in 1 file:

sbu062 2016-12-01 15:41 Rev.: 2090

now using scalar-based (food_proc_cost_v) within the object based generic component of to avoid code duplication

18 lines of code changed in 1 file:

sbu062 2016-12-01 15:15 Rev.: 2089

changelog update, gjør mer seinare hjemme

20 lines of code changed in 1 file:

sbu062 2016-12-01 15:12 Rev.: 2088

debug code only

9 lines of code changed in 1 file:

sbu062 2016-12-01 14:55 Rev.: 2087

(execute) procedure for EAT_FOOD now includes weighting by the distance to the food item

17 lines of code changed in 1 file:

sbu062 2016-12-01 14:31 Rev.: 2086

motivation expectancy for food now assumes 100% non-stochastic capture

11 lines of code changed in 1 file:

sbu062 2016-12-01 14:18 Rev.: 2085

food item capture probability added to (do_this) bound to EAT_FOOD

20 lines of code changed in 1 file:

sbu062 2016-12-01 13:53 Rev.: 2084

(do_this) bound to EAT_FOOD class can now use optional distance to food object

16 lines of code changed in 1 file:

sbu062 2016-12-01 13:42 Rev.: 2083

now using scalar-based (food_fitt_v) within the object based generic component of (food_fitting) to avoid code duplication

21 lines of code changed in 1 file:

sbu062 2016-12-01 13:22 Rev.: 2082

(food_fitting) now uses distance to food item to scale foraging cost

26 lines of code changed in 1 file:

sbu062 2016-12-01 13:09 Rev.: 2081

added food processing cost depending on the distance to food item in (food_process_cost)

85 lines of code changed in 1 file:

November 2016 »

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