November 2017 Commit Log

Number of Commits:
431
Number of Active Developers:
3
sbu062 2017-11-30 08:16 Rev.: 6584

web: line

2 lines of code changed in 1 file:

sbu062 2017-11-30 08:14 Rev.: 6583

web: fix link

1 lines of code changed in 1 file:

sbu062 2017-11-30 08:10

web: add link

6 lines of code changed in 3 files:

sbu062 2017-11-30 08:05 Rev.: 6579

web: typo

1 lines of code changed in 1 file:

sbu062 2017-11-30 07:49 Rev.: 6578

web: typo

17 lines of code changed in 1 file:

sbu062 2017-11-29 20:50

web: formatting

5 lines of code changed in 2 files:

sbu062 2017-11-29 20:46

web: typo

4 lines of code changed in 2 files:

sbu062 2017-11-29 17:19

web: small fix

5 lines of code changed in 2 files:

tla051 2017-11-29 15:53

modified to accept individual parameter settings for juv. and ad. mesopelagic fish

182 lines of code changed in 2 files:

sbu062 2017-11-29 15:07 Rev.: 6569

web: notes

4 lines of code changed in 1 file:

sbu062 2017-11-29 15:02 Rev.: 6568

web: getting started link

2 lines of code changed in 1 file:

sbu062 2017-11-29 15:01 Rev.: 6567

web: typo

1 lines of code changed in 1 file:

sbu062 2017-11-29 15:01 Rev.: 6566

web: getting started link

2 lines of code changed in 1 file:

sbu062 2017-11-29 14:58 Rev.: 6565

web: typo

2 lines of code changed in 1 file:

sbu062 2017-11-29 13:46 Rev.: 6564

web: now the aha model web site allows FULL ACCESS by robots.txt

1 lines of code changed in 1 file:

sbu062 2017-11-29 13:42 Rev.: 6563

web: small fix

1 lines of code changed in 1 file:

sbu062 2017-11-29 13:37

web: links added

4 lines of code changed in 2 files:

sbu062 2017-11-29 13:35 Rev.: 6560

web: link archive, tried

2 lines of code changed in 1 file:

sbu062 2017-11-29 13:28 Rev.: 6559

web: readme update

15 lines of code changed in 1 file:

sbu062 2017-11-29 13:26 Rev.: 6558

web: added post on intel compiler bug

40 lines of code changed in 1 file:

sbu062 2017-11-29 12:52 Rev.: 6557

web: link to building blocks

7 lines of code changed in 1 file:

sbu062 2017-11-29 12:30

web: small fixes

28 lines of code changed in 5 files:

sbu062 2017-11-29 11:29 Rev.: 6554

doc: changed model_brief, now shows reference implementation status of hedg_02_02

1 lines of code changed in 1 file:

sbu062 2017-11-29 10:13

web: readme with description how to add content to the AHA Model web site

35 lines of code changed in 2 files:

sbu062 2017-11-29 10:00 Rev.: 6551

web: small fix

1 lines of code changed in 1 file:

sbu062 2017-11-29 09:59 Rev.: 6550

web: added a few links

19 lines of code changed in 1 file:

sbu062 2017-11-29 09:24 Rev.: 6549

web: hedtools bold in text

6 lines of code changed in 1 file:

sbu062 2017-11-29 09:22 Rev.: 6548

web: try shorter label for hedtools, wrapping, and blog may disappear from upper menu

2 lines of code changed in 1 file:

sbu062 2017-11-29 09:14 Rev.: 6547

link to Lars' thesis

2 lines of code changed in 1 file:

sbu062 2017-11-29 09:08 Rev.: 6546

web: need shorter label to avoid wrapping in certain browser settings

1 lines of code changed in 1 file:

sbu062 2017-11-28 20:24 Rev.: 6545

web: small change

2 lines of code changed in 2 files:

sbu062 2017-11-28 20:20 Rev.: 6544

web: updated web index generation script after transition to Pelican

7 lines of code changed in 1 file:

sbu062 2017-11-28 18:41 Rev.: 6543

web: cognitive architecture

30 lines of code changed in 1 file:

sbu062 2017-11-28 18:04 Rev.: 6542

web: typo

1 lines of code changed in 1 file:

sbu062 2017-11-28 18:00

web: on gos

7 lines of code changed in 2 files:

sbu062 2017-11-28 17:53 Rev.: 6539

web: benchmark ifort vs gfort

14 lines of code changed in 1 file:

sbu062 2017-11-28 14:55

web: benchmark ifort vs gfort

913 lines of code changed in 4 files:

sbu062 2017-11-28 14:48

web: benchmark ifort vs gfort

507 lines of code changed in 3 files:

sbu062 2017-11-28 14:43 Rev.: 6534

web: benchmark ifort vs gfort

414 lines of code changed in 2 files:

sbu062 2017-11-28 14:24 Rev.: 6533

web: code updated

4 lines of code changed in 1 file:

cje012 2017-11-28 14:10 Rev.: 6532

Added foraging_required to the forward dataset and removed and renamed foraging into foraging_OXF to reflect the changes in the main hormone code.

140 lines of code changed in 1 file:

sbu062 2017-11-28 13:17 Rev.: 6531

web: code updated

5 lines of code changed in 1 file:

sbu062 2017-11-28 13:09 Rev.: 6530

web: alife updated

8 lines of code changed in 1 file:

sbu062 2017-11-28 13:02 Rev.: 6529

web: alife updated

16 lines of code changed in 1 file:

tla051 2017-11-28 13:00 Rev.: 6528

reset non-vis-range

3 lines of code changed in 1 file:

tla051 2017-11-28 12:57 Rev.: 6527

new qsw0 worked in

17 lines of code changed in 1 file:

tla051 2017-11-28 12:57 Rev.: 6526

lines re-indented

16 lines of code changed in 1 file:

tla051 2017-11-28 12:56 Rev.: 6525

updated to output twilight when sun below horizon

72 lines of code changed in 1 file:

sbu062 2017-11-28 12:54

web: cognition updated

6 lines of code changed in 2 files:

sbu062 2017-11-28 12:45 Rev.: 6522

web: alife updated

3 lines of code changed in 1 file:

sbu062 2017-11-28 12:39

web: code updated

12 lines of code changed in 2 files:

sbu062 2017-11-28 12:31

web: cognitive architecture in menu

6 lines of code changed in 2 files:

sbu062 2017-11-28 12:19 Rev.: 6517

web: links

9 lines of code changed in 1 file:

sbu062 2017-11-28 12:08 Rev.: 6516

web: papers

1 lines of code changed in 1 file:

sbu062 2017-11-28 12:07 Rev.: 6515

web: projects

4 lines of code changed in 1 file:

sbu062 2017-11-28 11:58

web: cognitive architecture in menu

4 lines of code changed in 2 files:

sbu062 2017-11-28 11:56 Rev.: 6512

web: output to main site

3 lines of code changed in 1 file:

cje012 2017-11-28 11:55 Rev.: 6511

1. Intake is no longer depending on environment. 2. New variable added: foraging_required; used in calculations of foraging_cost and M_foraging: the required foraging for a given intake in a given environment 3. Old foraging is now renamed into foraging_OXF; foraging intensity given OXF 4. Fixed bug in calculation of ValueOfE

17 lines of code changed in 1 file:

sbu062 2017-11-28 11:44 Rev.: 6510

web: cognitive architecture in menu

30 lines of code changed in 1 file:

sbu062 2017-11-28 11:34

web: cognitive architecture in menu

129 lines of code changed in 4 files:

sbu062 2017-11-28 11:28

web: note in rst

7 lines of code changed in 3 files:

sbu062 2017-11-28 11:18 Rev.: 6503

web: add to predictive dm

7 lines of code changed in 1 file:

sbu062 2017-11-28 11:05 Rev.: 6502

web: add small headline to last entry

2 lines of code changed in 1 file:

sbu062 2017-11-28 10:59

web: add small headline to last entry

5 lines of code changed in 2 files:

sbu062 2017-11-28 10:52

web: add small headline to last entry

10 lines of code changed in 3 files:

sbu062 2017-11-28 10:20 Rev.: 6496

web: support

6 lines of code changed in 1 file:

sbu062 2017-11-28 10:03

web: small changes

8 lines of code changed in 4 files:

sbu062 2017-11-28 09:52 Rev.: 6492

web: entry on csv_io benchmarking

1616 lines of code changed in 3 files:

sbu062 2017-11-28 09:40 Rev.: 6491

web: try internal link to hedtools

2 lines of code changed in 1 file:

sbu062 2017-11-28 09:35 Rev.: 6490

web: delete extra link

1 lines of code changed in 1 file:

sbu062 2017-11-28 09:34 Rev.: 6489

web: try shorter link

1 lines of code changed in 1 file:

sbu062 2017-11-28 09:32 Rev.: 6488

web: small fixes here 'there

19 lines of code changed in 4 files:

sbu062 2017-11-28 09:19 Rev.: 6487

web: added to brief howto on Pelican

23 lines of code changed in 1 file:

sbu062 2017-11-28 01:16 Rev.: 6486

web: further changes

28 lines of code changed in 2 files:

sbu062 2017-11-28 01:00 Rev.: 6485

web: small fix

1 lines of code changed in 1 file:

sbu062 2017-11-28 00:58 Rev.: 6484

web: reformated in restructured text, support local images

110 lines of code changed in 1 file:

sbu062 2017-11-28 00:57 Rev.: 6483

web: further changes, added first transient article

5806 lines of code changed in 3 files:

sbu062 2017-11-27 23:25 Rev.: 6482

web: further changes to new site

49 lines of code changed in 2 files:

sbu062 2017-11-27 23:05 Rev.: 6481

web: added more pieces and meat

540 lines of code changed in 10 files:

sbu062 2017-11-27 21:01 Rev.: 6480

web: added readme

4 lines of code changed in 1 file:

sbu062 2017-11-27 20:59 Rev.: 6479

web: added main intro pages for pelicam site

133 lines of code changed in 2 files:

sbu062 2017-11-27 20:08 Rev.: 6478

web: started main aha model webpage using Pelican and Python, so far config only

40 lines of code changed in 1 file:

sbu062 2017-11-25 09:39 Rev.: 6477

doc: camel case example doesn't render rightly, deleted

3 lines of code changed in 3 files:

sbu062 2017-11-24 19:53 Rev.: 6476

doc: backported link at headline

4 lines of code changed in 2 files:

sbu062 2017-11-24 19:50 Rev.: 6475

doc: added hedline links at top

2 lines of code changed in 1 file:

sbu062 2017-11-24 18:06 Rev.: 6474

doc: now use domain name for aha project: http://ahamodel.uib.no/

10 lines of code changed in 1 file:

sbu062 2017-11-24 14:50 Rev.: 6473

backported: (ga_mutat_adaptive): increment mutation rate if n of growing agents is less than lower limit

44 lines of code changed in 2 files:

sbu062 2017-11-24 14:35 Rev.: 6472

(ga_mutat_adaptive): increment mutation rate if n of growing agents is less than lower limit

22 lines of code changed in 1 file:

sbu062 2017-11-24 13:39 Rev.: 6471

doc: domain name is now http://ahamodel.uib.no

5 lines of code changed in 1 file:

sbu062 2017-11-24 13:31

doc: added domain name for aha web http://ahamodel.uib.no/

72 lines of code changed in 12 files:

sbu062 2017-11-24 13:26 Rev.: 6468

doc: domain name is now http://ahamodel.uib.no

36 lines of code changed in 5 files:

sbu062 2017-11-24 13:21 Rev.: 6467

hugely increase the vertical scatter of food items while migrating

3 lines of code changed in 1 file:

sbu062 2017-11-24 13:12 Rev.: 6466

doc: added domain name for aha web http://ahamodel.uib.no/

90 lines of code changed in 3 files:

sbu062 2017-11-24 13:05 Rev.: 6465

use aha model domain name: http://ahamodel.uib.no/

12 lines of code changed in 1 file:

tla051 2017-11-24 12:06 Rev.: 6464

played with eye sensitivity and related parameters

8 lines of code changed in 1 file:

tla051 2017-11-23 16:32 Rev.: 6463

beep sound upon termination added, parameter values changed

90 lines of code changed in 1 file:

cje012 2017-11-23 10:47 Rev.: 6462

Added individual plots and some minor changes where code is moved arround.

65 lines of code changed in 1 file:

sbu062 2017-11-22 18:09 Rev.: 6461

(preevol_steps_adaptive): tweak interpolation param, longer first steps

2 lines of code changed in 2 files:

sbu062 2017-11-22 17:32 Rev.: 6460

backported: (gamma2gene): use parameter for setting minimum perception, was zero or tolerance_low

30 lines of code changed in 2 files:

sbu062 2017-11-22 17:17 Rev.: 6459

(gamma2gene): use parameter for setting minimum perception, was zero or tolerance_low

15 lines of code changed in 1 file:

sbu062 2017-11-22 13:48 Rev.: 6458

run W: fixed steps 280, two longer cycles forced, predation remains

1 lines of code changed in 1 file:

sbu062 2017-11-22 13:47 Rev.: 6457

backported svn 6449 from 02: added minimum smr parameter and fixed (init)

7 lines of code changed in 3 files:

sbu062 2017-11-22 13:47 Rev.: 6456

backported svn 6446: (get_food_mean_dist): added option to not return null on undefined, may avoid NaNs in outputs

22 lines of code changed in 2 files:

sbu062 2017-11-22 13:47 Rev.: 6455

backported svn 6445 from 02: POSSIBLE BUG FIX: (visibility) for SPATIAL did not convert automatically from m to cm, now fixed; (visibility) method should always auto convert for consistency

19 lines of code changed in 1 file:

sbu062 2017-11-22 13:46 Rev.: 6454

backport from 02: added minimum smr parameter and fixed (init)

18 lines of code changed in 2 files:

sbu062 2017-11-22 13:46 Rev.: 6453

backported from 02 svn 6446: (get_food_mean_dist): added option to not return null on undefined, may avoid NaNs in outputs

22 lines of code changed in 2 files:

sbu062 2017-11-22 13:46 Rev.: 6452

backported svn 6445 from 02: POSSIBLE BUG FIX: (visibility) for SPATIAL did not convert automatically from m to cm, now fixed; (visibility) method should always auto convert for consistency

18 lines of code changed in 1 file:

sbu062 2017-11-22 13:45 Rev.: 6451

return normal steps

1 lines of code changed in 1 file:

sbu062 2017-11-22 13:12 Rev.: 6450

run F7:force fixed steps with longer cycle predation enabled

1 lines of code changed in 1 file:

sbu062 2017-11-22 13:09 Rev.: 6449

added minimum smr parameter and fixed (init)

8 lines of code changed in 2 files:

sbu062 2017-11-22 12:07 Rev.: 6447

run F7:force fixed steps with longer cycle predation enabled

1 lines of code changed in 1 file:

sbu062 2017-11-22 12:06 Rev.: 6446

(get_food_mean_dist): added option to not return null on undefined, may avoid NaNs in outputs

22 lines of code changed in 2 files:

sbu062 2017-11-22 12:06 Rev.: 6445

POSSIBLE BUG FIX: (visibility) for SPATIAL did not convert automatically from m to cm, now fixed; (visibility) method should always auto convert for consistency

18 lines of code changed in 1 file:

sbu062 2017-11-21 14:51 Rev.: 6444

run F8: restore normal adaptive steps

1 lines of code changed in 1 file:

sbu062 2017-11-21 14:49 Rev.: 6443

run F7:force fixed steps with longer cycle predation enabled

1 lines of code changed in 1 file:

sbu062 2017-11-21 14:42 Rev.: 6442

return to normal

1 lines of code changed in 1 file:

sbu062 2017-11-21 14:40 Rev.: 6441

run W: fixed steps 280, two longer cycles forced, predation remains

1 lines of code changed in 1 file:

sbu062 2017-11-21 14:36

(generations_stat_record_write): added average distance to food items in perception, backported from svn 6437-6438 in 02

119 lines of code changed in 2 files:

sbu062 2017-11-21 14:15 Rev.: 6438

(generations_stat_record_write): renumber

52 lines of code changed in 1 file:

sbu062 2017-11-21 14:15 Rev.: 6437

(generations_stat_record_write): added average distance to food items in perception for safe and dangerous habitats

11 lines of code changed in 1 file:

sbu062 2017-11-21 14:15 Rev.: 6436

run W: 100 longer cycles, cycle size 140, forced debug steps 2 cycles 280

2 lines of code changed in 1 file:

sbu062 2017-11-21 13:07 Rev.: 6435

(save_dynamics): boundaries for minimum distances for visrange reset to 400, 200, 100, 20

8 lines of code changed in 1 file:

sbu062 2017-11-21 13:07 Rev.: 6434

tests: added message to test, was confusing failed if debugging flag was set

0 lines of code changed in 2 files:

sbu062 2017-11-21 13:07 Rev.: 6433

(save_dynamics): boundaries for minimum distances for visrange reset to 400, 200, 100, 20

9 lines of code changed in 1 file:

sbu062 2017-11-21 13:07 Rev.: 6432

tests: added message to test, was confusing failed if debugging flag was set

1 lines of code changed in 1 file:

sbu062 2017-11-21 12:59 Rev.: 6431

return to normal

1 lines of code changed in 1 file:

sbu062 2017-11-21 12:56 Rev.: 6430

tests: added message to test, was confusing failed if debugging flag was set

0 lines of code changed in 2 files:

sbu062 2017-11-21 12:56 Rev.: 6429

(save_dynamics): boundaries for minimum distances for visrange reset to 400, 200, 100, 20

9 lines of code changed in 1 file:

sbu062 2017-11-21 12:56 Rev.: 6428

run W: fixed steps 280, two longer cycles forced, predation remains

2 lines of code changed in 1 file:

sbu062 2017-11-21 12:55 Rev.: 6427

run W: 100 longer cycles, cycle size 140

2 lines of code changed in 1 file:

sbu062 2017-11-21 12:08 Rev.: 6426

(do_behave): deleted vertical migration behaviours: no calls for select, compare arousal, execute

1 lines of code changed in 1 file:

sbu062 2017-11-21 11:52

backported changes from 02

18 lines of code changed in 2 files:

sbu062 2017-11-21 11:31 Rev.: 6423

(minimum_depth_visibility): higher tolerance

1 lines of code changed in 1 file:

sbu062 2017-11-21 11:31 Rev.: 6422

(minimum_depth_visibility): renamed (f) wrapper function, longer name more visible

8 lines of code changed in 1 file:

sbu062 2017-11-20 20:36

backported changes from 02

747 lines of code changed in 12 files:

sbu062 2017-11-20 18:36 Rev.: 6419

(zeroin): fixed doc for parameters

24 lines of code changed in 1 file:

sbu062 2017-11-20 16:55 Rev.: 6418

(zeroin): moved to commondata as it is of general use

134 lines of code changed in 2 files:

sbu062 2017-11-20 16:29 Rev.: 6417

doc: added small details to (save_dynamics)

3 lines of code changed in 1 file:

sbu062 2017-11-20 16:29 Rev.: 6416

(save_dynamics): get rid of missing values, set appropriate ranges for full or zero visibility

9 lines of code changed in 2 files:

sbu062 2017-11-20 16:29 Rev.: 6415

(save_dynamics): added forgotten conversion from meters

10 lines of code changed in 1 file:

sbu062 2017-11-20 16:29 Rev.: 6414

(save_dynamics): added distance at which visibility falls below 200; (spatial_visibility_visual_range_m): added units are meters

14 lines of code changed in 1 file:

sbu062 2017-11-20 16:29 Rev.: 6413

(save_dynamics): explicit average area of standard food item used, rename vars

19 lines of code changed in 1 file:

sbu062 2017-11-20 16:29 Rev.: 6412

tests: increased timeouts, writing data is long

1 lines of code changed in 1 file:

sbu062 2017-11-20 16:29 Rev.: 6411

doc: fixed changed link names in (minimum_depth_visibility)

6 lines of code changed in 1 file:

sbu062 2017-11-20 16:29 Rev.: 6410

(save_dynamics): added procs to calculate the depth at which food item visibility falls below specific values: 100, 20, 5

22 lines of code changed in 1 file:

sbu062 2017-11-20 14:46 Rev.: 6409

(minimum_depth_visibility): minor reformat

4 lines of code changed in 1 file:

sbu062 2017-11-20 14:46 Rev.: 6408

(minimum_depth_visibility): implemented diagnostic function to calculate the depth at which the visibility of a spatial object falls below a specific value

270 lines of code changed in 1 file:

tla051 2017-11-20 13:31 Rev.: 6407

convergence loop for backward added

108 lines of code changed in 1 file:

tla051 2017-11-20 09:53 Rev.: 6406

alpha and beta for respiration corrected (O2 conversion), coefficients for GER now for mesopelagics

29 lines of code changed in 1 file:

sbu062 2017-11-19 10:51 Rev.: 6405

return to normal

3 lines of code changed in 1 file:

sbu062 2017-11-19 10:49 Rev.: 6404

run FW: fixed steps, predation disabled, higher perception error (0.1), even longer cycle as in F5

3 lines of code changed in 1 file:

sbu062 2017-11-19 10:45 Rev.: 6403

(population_ga_reproduce_max): reset the maximum number of reproducing agents in GA, it now depends on the popsize, but still larger than absolute minimunm

14 lines of code changed in 2 files:

sbu062 2017-11-18 17:33 Rev.: 6402

return to normal

2 lines of code changed in 1 file:

sbu062 2017-11-18 17:29 Rev.: 6401

run F5: fixed steps, predation disabled, low no perception error (0.01), even longer cycle

2 lines of code changed in 1 file:

sbu062 2017-11-18 17:28 Rev.: 6400

longer diel cycles 70 steps, preevol forced 210 = 3 cycles for debug

2 lines of code changed in 1 file:

sbu062 2017-11-18 10:38 Rev.: 6399

doc: small addition, backported from 02

8 lines of code changed in 2 files:

sbu062 2017-11-18 10:36 Rev.: 6398

doc: small addition

4 lines of code changed in 1 file:

sbu062 2017-11-18 09:59 Rev.: 6397

backported changed from 02: important: reduced dielcycles to 350, corresponds to 40 steps per cycle; debug time steps set to 160, corresponding to 4 cycles (dielcycles 350)

14 lines of code changed in 2 files:

sbu062 2017-11-18 09:52 Rev.: 6396

return to normal, delete obsolete frames

5 lines of code changed in 1 file:

sbu062 2017-11-18 09:40 Rev.: 6395

run F8: fixed steps, predation disabled, low no perception error (0.01), longer cycle

2 lines of code changed in 1 file:

sbu062 2017-11-18 09:40 Rev.: 6394

important: debug time steps set to 160, corresponding to 4 cycles (dielcycles 350)

1 lines of code changed in 1 file:

sbu062 2017-11-18 09:40 Rev.: 6393

important: reduced dielcycles to 350, corresponds to 40 steps per cycle; were few grown with small perception error in spite of clear vertical migration at the first generation

2 lines of code changed in 1 file:

sbu062 2017-11-17 21:29 Rev.: 6392

(generations_loop_ga): disable halting in Gen 1 when growing is 1, log warning message only

2 lines of code changed in 1 file:

sbu062 2017-11-17 15:01

doc: gamma attention etc obsolete on class diagram, backported from 02

19980 lines of code changed in 6 files:

sbu062 2017-11-17 14:59 Rev.: 6389

doc: gamma attention etc obsolete on class diagram

9990 lines of code changed in 3 files:

sbu062 2017-11-17 14:44 Rev.: 6388

backported fix from 02

10 lines of code changed in 2 files:

sbu062 2017-11-17 14:41 Rev.: 6387

doc: small fix

5 lines of code changed in 1 file:

sbu062 2017-11-17 14:41 Rev.: 6386

run: returned normal

3 lines of code changed in 1 file:

sbu062 2017-11-17 14:15 Rev.: 6385

backported latest changes, doc on GArch from 02

14595 lines of code changed in 4 files:

sbu062 2017-11-17 14:15 Rev.: 6384

doc: updated global scheme of cognitive architecture

6742 lines of code changed in 3 files:

sbu062 2017-11-17 14:15 Rev.: 6383

backported latest changes, doc on GArch from 02

14595 lines of code changed in 4 files:

sbu062 2017-11-17 13:57 Rev.: 6382

run F8: fixed steps, predation disabled, no perception error (0)

3 lines of code changed in 1 file:

sbu062 2017-11-17 12:14 Rev.: 6381

doc: reorder parts

131 lines of code changed in 1 file:

sbu062 2017-11-17 12:09 Rev.: 6380

doc: GA after CA

38 lines of code changed in 1 file:

sbu062 2017-11-17 12:01 Rev.: 6379

doc: small addition on cognitive architecture

6 lines of code changed in 1 file:

sbu062 2017-11-17 11:34 Rev.: 6378

doc: updated scheme of cognitive architecture

14449 lines of code changed in 3 files:

sbu062 2017-11-17 10:36 Rev.: 6377

doc: addition on cognitive architecture

44 lines of code changed in 1 file:

sbu062 2017-11-17 08:52 Rev.: 6376

doc: small addition on cognitive architecture

5 lines of code changed in 1 file:

sbu062 2017-11-17 08:45 Rev.: 6375

doc: small addition on cognitive architecture

3 lines of code changed in 1 file:

sbu062 2017-11-17 08:39 Rev.: 6374

doc: confusing without subtitle

1 lines of code changed in 1 file:

sbu062 2017-11-17 08:32

doc: updated global scheme of cognitive architecture

13484 lines of code changed in 6 files:

sbu062 2017-11-16 19:49 Rev.: 6371

backported from 02, svn 8366-6368: (gamma2gene): nearzero error cv disables perception error, lower tolerance limit for min value

24 lines of code changed in 2 files:

sbu062 2017-11-16 18:48

doc: copied broken binary file wrongly imported from svn, was zero size

0 lines of code changed in 2 files:

sbu062 2017-11-16 18:30 Rev.: 6368

(gamma2gene): fix lower zero limit to TOLERANCE_LOW_DEF_SRP

6 lines of code changed in 1 file:

sbu062 2017-11-16 18:30 Rev.: 6367

(gamma2gene): lower zero limit to TOLERANCE_LOW_DEF_HRP

6 lines of code changed in 1 file:

sbu062 2017-11-16 18:30 Rev.: 6366

(gamma2gene): nearzero error cv disables perception error

10 lines of code changed in 1 file:

sbu062 2017-11-16 16:48 Rev.: 6365

restore normal

2 lines of code changed in 1 file:

sbu062 2017-11-16 16:41 Rev.: 6364

run F7: fixed steps, predation disabled, perception errors low 0.01

3 lines of code changed in 1 file:

sbu062 2017-11-16 16:33 Rev.: 6363

restore normal

2 lines of code changed in 1 file:

sbu062 2017-11-16 15:51 Rev.: 6362

run F1: fixed steps, predation disabled, perception errors 0.1

2 lines of code changed in 1 file:

sbu062 2017-11-16 15:45 Rev.: 6361

backported from 02: Cognitive architecture doc and higher perception error PERCEPT_ERROR_CV_DEF

170 lines of code changed in 2 files:

sbu062 2017-11-16 15:41 Rev.: 6360

(generations_loop_ga): stopping rule for gen 1 in CHECK_DETERIORATE

14 lines of code changed in 1 file:

sbu062 2017-11-16 15:26 Rev.: 6359

neat on cleandata deletes lock file and tmp files

2 lines of code changed in 2 files:

sbu062 2017-11-16 15:24 Rev.: 6358

run: increase perception error (cv)

1 lines of code changed in 1 file:

sbu062 2017-11-16 15:24 Rev.: 6357

neat on cleandata deletes lock file and tmp files

1 lines of code changed in 1 file:

sbu062 2017-11-16 15:06 Rev.: 6356

doc: placed arrows

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sbu062 2017-11-16 14:47 Rev.: 6355

doc: fix

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sbu062 2017-11-16 14:44 Rev.: 6354

doc: outline of the cognitive architecture

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sbu062 2017-11-16 13:10

doc: added scheme

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sbu062 2017-11-16 13:09

added scheme

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sbu062 2017-11-16 13:07 Rev.: 6347

doc: added scheme os global perception to gos scheme

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sbu062 2017-11-15 18:27 Rev.: 6346

return to normal non-debug

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sbu062 2017-11-15 18:23 Rev.: 6345

run F1: fixed steps, predation disabled, perception error low 0.01

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sbu062 2017-11-15 18:18 Rev.: 6344

backport from 02: use the default perception error CV parameter PERCEPT_ERROR_CV_DEF in all 'real' perception CV error definitions, for all motivations

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sbu062 2017-11-15 18:05 Rev.: 6343

use the default perception error CV parameter PERCEPT_ERROR_CV_DEF in all 'real' perception CV error definitions, for all motivations

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sbu062 2017-11-15 18:04 Rev.: 6342

added default perception error CV parameter

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sbu062 2017-11-15 15:53 Rev.: 6341

doc: deleted extra text, doesn't render

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sbu062 2017-11-15 15:44 Rev.: 6340

doc: addition to head doc

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sbu062 2017-11-15 15:12

doc: small changes head doc

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tla051 2017-11-15 15:09 Rev.: 6337

conversion factor ind. copepods to J modified and output to txt from backwards simplified

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tla051 2017-11-15 15:09 Rev.: 6336

conversion factor from ind. prey to J modified

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sbu062 2017-11-15 14:37 Rev.: 6335

doc: link to neuronal response func, backported from 01

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sbu062 2017-11-15 14:33 Rev.: 6334

doc: link to neuronal response func

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sbu062 2017-11-15 14:11 Rev.: 6333

doc: updated appraisal scheme, backported from 01

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sbu062 2017-11-15 14:07 Rev.: 6332

doc: updated appraisal scheme

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sbu062 2017-11-15 13:23 Rev.: 6331

svn: keywords added to the behaviour module source file

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sbu062 2017-11-15 13:20 Rev.: 6330

doc: added the_behaviour module to agent class diagram outlook, backported from 01 svn rev. 6327

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sbu062 2017-11-15 13:16 Rev.: 6329

THE_BEHAVIOUR: update module name in doxygen comments to 'the_behaviour', in headline doc and global parameters, backported from 01 svn rev.6328

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sbu062 2017-11-15 13:06 Rev.: 6328

THE_BEHAVIOUR: update module name in doxygen comments to 'the_behaviour', in headline doc and global parameters

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sbu062 2017-11-15 12:50 Rev.: 6327

doc: added the_behaviour module to agent class diagram outlook

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sbu062 2017-11-15 12:35

MAJOR REORGANISATION: separated behaviour into a separate module THE_BEHAVIOUR in mod_behav.f90: backported from _01 svn rev.6316-6324

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sbu062 2017-11-15 12:31 Rev.: 6324

THE_BEHAVIOUR: update module name in doxygen comments to 'the_behaviour', this done after lunch

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sbu062 2017-11-15 12:31 Rev.: 6323

THE_BEHAVIOUR: update module name in doxygen comments to 'the_behaviour', this done before lunch

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sbu062 2017-11-15 12:31 Rev.: 6322

THE_BEHAVIOUR: update module name in doxygen comments to 'the_behaviour'

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sbu062 2017-11-15 12:31 Rev.: 6321

access rights: init methods never called directly

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sbu062 2017-11-15 12:31 Rev.: 6320

small reformat

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sbu062 2017-11-15 12:31 Rev.: 6319

rename (init_neuro), (init_neurobio) is more appropriate

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sbu062 2017-11-15 12:31 Rev.: 6318

THE_BEHAVIOUR: headline doc

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sbu062 2017-11-15 12:31 Rev.: 6317

MAJOR REORGANISATION: added THE_BEHAVIOUR module

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sbu062 2017-11-15 12:31 Rev.: 6316

MAJOR REORGANISATION: separated behaviour into a separate module THE_BEHAVIOUR in mod_behav.f90

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cje012 2017-11-15 12:15 Rev.: 6315

Added 3 new plots: (1) x = length, y=R_cat, colour=hormonelevel, facet_wrap = environment rounded (2) x = THF, y=SMR_std & SMR_THF, colour=R_cat (3) x = THF, y = O2max_THF & O2_used, colour=R_cat

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sbu062 2017-11-15 07:22 Rev.: 6314

parameter to disable predation in ga lifecycle for debugging, backported from _03 with fix

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sbu062 2017-11-15 07:21 Rev.: 6313

fix logical

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sbu062 2017-11-15 07:21 Rev.: 6312

parameter to disable predation in ga lifecycle for debugging

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sbu062 2017-11-15 07:19 Rev.: 6311

parameter to disable predation in ga lifecycle for debugging, backported from _03 with fix

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sbu062 2017-11-15 07:19 Rev.: 6310

initial agent depth gaussian 500, middle of the shallow environment

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sbu062 2017-11-15 07:19 Rev.: 6309

depth of habitats reduced to 1000

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sbu062 2017-11-15 07:18 Rev.: 6308

substitute full vertical migration in the reduced model with resource random walk

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sbu062 2017-11-15 06:00 Rev.: 6307

restore default svn 6304

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sbu062 2017-11-15 05:58 Rev.: 6306

run F4: force fixed steps, disabled predation, full behaviour selection

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sbu062 2017-11-14 19:26

(rwalk_food_step): backported from _03: (rwalk_food_step): Gaussian walk only substitute for food item migration for simplified model _03

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sbu062 2017-11-14 19:26 Rev.: 6303

(rwalk_food_step): Gaussian walk only substitute for food item migration for simplified model _03

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tla051 2017-11-14 14:36 Rev.: 6302

changes in write to file for backwards loop, visual range as output included, parameters changed

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tla051 2017-11-14 14:36 Rev.: 6301

included visual range in the output

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sbu062 2017-11-14 13:20 Rev.: 6300

(rwalk): random waljk method for stochastic migration of food items

173 lines of code changed in 3 files:

sbu062 2017-11-14 10:34 Rev.: 6299

web: smal fix on index

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sbu062 2017-11-14 10:14 Rev.: 6298

typo fix

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sbu062 2017-11-14 08:25

web: updated index intro

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sbu062 2017-11-14 08:18

web: updated index intro

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sbu062 2017-11-14 08:05

web: updated index intro

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tla051 2017-11-13 15:54 Rev.: 6290

Gastric evacuation rate modified and parameters changed from Rosland and Giske 1994, to Hudson et al.

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sbu062 2017-11-13 15:49 Rev.: 6289

run F1: restored normal, relaxed adaptive steps at Gen 1, relaxed GA deteriorate criterion

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sbu062 2017-11-13 15:37 Rev.: 6288

run F2: force fixed steps, full behaviour selection

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sbu062 2017-11-13 15:33 Rev.: 6287

named if construct REPLENISH_FOOD

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sbu062 2017-11-13 14:57 Rev.: 6286

(generations_loop_ga): replenish food resources to the fully available state before each new generation in GENERATIONS_PREEVOL, assemble global array after this. This is backported from _03

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sbu062 2017-11-13 14:52 Rev.: 6285

(generations_loop_ga): assemble foor resources array after (replenish)

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sbu062 2017-11-13 14:44 Rev.: 6284

(generations_loop_ga): replenish food resources to the fully available state before each new generation in GENERATIONS_PREEVOL

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sbu062 2017-11-13 14:33 Rev.: 6283

(replenish): backported from _03

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sbu062 2017-11-13 14:23 Rev.: 6282

(replenish): randomly draw food items from previous initialised if resource shrinks

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sbu062 2017-11-13 14:23 Rev.: 6281

(replenish): reinit method for food resource

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sbu062 2017-11-13 14:23 Rev.: 6280

depth of habitats reduced to 2000

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sbu062 2017-11-13 14:23 Rev.: 6279

deprecate universe object, was unused

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sbu062 2017-11-13 12:54 Rev.: 6278

deprecate universe object, was unused (backported from _03)

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sbu062 2017-11-13 12:38 Rev.: 6277

fix depth in universe

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sbu062 2017-11-13 12:10 Rev.: 6276

updated model descriptors

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sbu062 2017-11-13 09:18 Rev.: 6274

add blank line

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sbu062 2017-11-10 19:55 Rev.: 6273

(reproduction_n_offspring_calc): added comment for genetically defined body size

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sbu062 2017-11-10 19:55 Rev.: 6272

(reproduction_n_offspring_calc): fixed energy and length for non-genetic body size: no need to guess from (gamma2gene_fake_vals)

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sbu062 2017-11-10 19:54 Rev.: 6271

(reproduction_n_offspring_calc): added comment for genetically defined body size (_01)

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sbu062 2017-11-10 19:21

doc: small addition

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sbu062 2017-11-10 18:55 Rev.: 6268

move in more logical order

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sbu062 2017-11-10 18:55 Rev.: 6267

better example with loop

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sbu062 2017-11-10 18:54 Rev.: 6266

move in more logical order

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sbu062 2017-11-10 18:54 Rev.: 6265

better example with loop

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sbu062 2017-11-10 16:46

illustrate whols-array sum

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sbu062 2017-11-10 15:40 Rev.: 6262

backported from HEDG02_02: use intrinsic count instead of loops

14 lines of code changed in 1 file:

sbu062 2017-11-10 15:34 Rev.: 6261

use intrinsic count instead of loops

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sbu062 2017-11-10 14:50 Rev.: 6260

update list of machines

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sbu062 2017-11-10 14:46 Rev.: 6259

doc: another fix main page

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sbu062 2017-11-10 14:44 Rev.: 6258

small addition

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sbu062 2017-11-10 14:43 Rev.: 6257

doc: copied purpose from Jarl HED23

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sbu062 2017-11-10 14:39 Rev.: 6256

doc: copied purpose from Jarl HED23, backported from _02

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sbu062 2017-11-10 14:38

doc: copied purpose from Jarl HED23

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sbu062 2017-11-10 14:22 Rev.: 6253

doc: scope notes, backported from _02

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sbu062 2017-11-10 14:21 Rev.: 6252

doc: scope notes

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sbu062 2017-11-10 14:16 Rev.: 6251

doc: listed fitness backends, backported from _02

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sbu062 2017-11-10 14:16 Rev.: 6250

doc: listed fitness backends

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sbu062 2017-11-10 13:57 Rev.: 6249

doc: backported hg59-62 from _02

41 lines of code changed in 2 files:

sbu062 2017-11-10 13:54 Rev.: 6248

doc: small fix

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sbu062 2017-11-10 13:50 Rev.: 6247

doc: link to base method

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sbu062 2017-11-10 11:48 Rev.: 6246

doc: link to permute_random

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sbu062 2017-11-10 11:41 Rev.: 6245

doc: added on GA

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tla051 2017-11-10 10:39 Rev.: 6244

# more annotations cleaned up and amended

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tla051 2017-11-10 10:03 Rev.: 6243

new script for simulation plots in R

121 lines of code changed in 1 file:

tla051 2017-11-10 10:00 Rev.: 6242

#comments edited

148 lines of code changed in 1 file:

sbu062 2017-11-10 08:15 Rev.: 6241

doc: procedures bold, backported

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sbu062 2017-11-10 08:14 Rev.: 6240

doc: procedures bold

3273 lines of code changed in 3 files:

sbu062 2017-11-09 22:22

doc: imported from eps, text to curves

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sbu062 2017-11-09 22:17 Rev.: 6237

doc: broken, test plain svg

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sbu062 2017-11-09 22:14

doc: width 750 reduced

666 lines of code changed in 2 files:

sbu062 2017-11-09 22:03

doc: small fix

6 lines of code changed in 2 files:

sbu062 2017-11-09 21:48 Rev.: 6232

returned normal popsize

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sbu062 2017-11-09 21:41 Rev.: 6231

run F04: popsize increased to 20,000

1 lines of code changed in 1 file:

sbu062 2017-11-09 21:38 Rev.: 6230

return normal popsize and normal run, predation left enabled

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sbu062 2017-11-09 21:35 Rev.: 6229

run F3: force fixed steps, EATONLY, predation enabled, popsize 20000

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sbu062 2017-11-09 18:49 Rev.: 6228

doc: small addition, backported

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sbu062 2017-11-09 18:48 Rev.: 6227

doc: small add

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sbu062 2017-11-09 18:38 Rev.: 6226

doc: small fix

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sbu062 2017-11-09 18:34

doc: typo

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sbu062 2017-11-09 16:46 Rev.: 6223

doc: reorganise, backported

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sbu062 2017-11-09 16:46 Rev.: 6222

doc: reorganise

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sbu062 2017-11-09 16:37 Rev.: 6221

doc: small fix, backported

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sbu062 2017-11-09 16:37 Rev.: 6220

doc: small fix

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sbu062 2017-11-09 16:32 Rev.: 6219

doc: small fix, backport

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sbu062 2017-11-09 16:32 Rev.: 6218

doc: small fix

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sbu062 2017-11-09 16:19

doc: nonparametrics

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sbu062 2017-11-09 16:02 Rev.: 6215

doc: small fix, backport _02 hg43

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sbu062 2017-11-09 16:01

doc: small fix

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sbu062 2017-11-09 15:56 Rev.: 6212

doc: small fix

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sbu062 2017-11-09 15:51 Rev.: 6211

doc: small addition, from hg41 _02

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sbu062 2017-11-09 15:50 Rev.: 6210

doc: small addition

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sbu062 2017-11-09 15:45 Rev.: 6209

doc: small fix, backported _02 hg40

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sbu062 2017-11-09 15:43 Rev.: 6208

doc: small fix

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sbu062 2017-11-09 15:40 Rev.: 6207

doc: added on life cycle

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sbu062 2017-11-09 15:40 Rev.: 6206

doc: added on life cycle: backport hg39 _02

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sbu062 2017-11-09 15:27 Rev.: 6205

doc: added on life cycle: backported from _02 hg38

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sbu062 2017-11-09 15:27 Rev.: 6204

doc: added on life cycle

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sbu062 2017-11-09 15:07 Rev.: 6203

(population_lifecycle_step_preevol): added forgotten (stomach_empify) call: backported from _02 hg37

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sbu062 2017-11-09 15:07 Rev.: 6202

doc: added on life cycle (ported from _02 hg36)

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sbu062 2017-11-09 15:07 Rev.: 6201

(population_lifecycle_step_preevol): added forgotten (stomach_empify) call

8 lines of code changed in 1 file:

sbu062 2017-11-09 15:06 Rev.: 6200

doc: added on life cycle

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sbu062 2017-11-09 12:10 Rev.: 6199

doc: scheme title

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sbu062 2017-11-09 12:06 Rev.: 6198

doc: updated predictive scheme

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sbu062 2017-11-09 12:06 Rev.: 6197

doc: updated predictive scheme (ported from _02)

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sbu062 2017-11-09 10:57 Rev.: 6196

doc: more doc text added (ported from _02)

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sbu062 2017-11-09 10:55 Rev.: 6195

doc: more doc text added

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sbu062 2017-11-09 10:47 Rev.: 6194

doc: sublist fix

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sbu062 2017-11-09 10:37 Rev.: 6193

doc: ported hg3918 from _01

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sbu062 2017-11-09 10:37 Rev.: 6192

doc: more doc on predictive decision making

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tla051 2017-11-09 07:14 Rev.: 6191

replaced == by strcpm

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tla051 2017-11-09 07:04 Rev.: 6190

updated graphical features

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tla051 2017-11-09 07:03 Rev.: 6189

updated to output latitude too

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sbu062 2017-11-08 13:35 Rev.: 6188

ported small piece from _02

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sbu062 2017-11-08 13:35 Rev.: 6187

doc: fixed descriptors

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sbu062 2017-11-08 13:34 Rev.: 6186

doc: small fix

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sbu062 2017-11-08 13:34 Rev.: 6185

doc: fixed descriptors

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sbu062 2017-11-08 13:21 Rev.: 6184

adaptive mutation rate based on popsize fall

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sbu062 2017-11-08 13:20 Rev.: 6183

run: restore normal. left adaptive mutation rate based on popsize

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sbu062 2017-11-08 13:10 Rev.: 6182

run F3: force fixed steps, EATONLY, fitness based on mass eaten, adaptive mutation rate based on popsize

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sbu062 2017-11-08 12:47 Rev.: 6181

doc: model descriptors

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doc: model descriptors ported from _02

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sbu062 2017-11-08 12:32 Rev.: 6179

doc: ported model abstract from _02

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sbu062 2017-11-08 12:32 Rev.: 6178

ported hg21-24 from HEDG02_02, model abstract mechanism

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sbu062 2017-11-08 12:32 Rev.: 6177

doc: model abstract

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sbu062 2017-11-08 12:32 Rev.: 6176

(system_init): reformatted logger warning to fit on normal terminal width

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sbu062 2017-11-08 12:32 Rev.: 6175

implemented model abstract mechanism

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sbu062 2017-11-07 13:43 Rev.: 6174

doc: continue Predictive decision making

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sbu062 2017-11-07 13:37 Rev.: 6173

doc: added on Predictive decision making

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sbu062 2017-11-07 11:56 Rev.: 6172

normal: restored normal model debug parameters

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sbu062 2017-11-07 11:44 Rev.: 6171

run F3: force fixed steps, EATONLY

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sbu062 2017-11-07 11:39 Rev.: 6170

run F1: disable fixed steps, normal run

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sbu062 2017-11-07 11:35 Rev.: 6169

run F2: force fixed steps, full behaviour selection

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sbu062 2017-11-07 11:16 Rev.: 6168

ported (preevol_steps_adaptive): implemented fixed preevol time steps switch for debugging/testing

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sbu062 2017-11-07 11:01 Rev.: 6167

ported (generations_loop_ga): relaxed GA deterioration condition CHECK_DETERIORATE

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sbu062 2017-11-07 10:58 Rev.: 6166

(generations_loop_ga): relaxed GA deterioration condition CHECK_DETERIORATE

6 lines of code changed in 1 file:

sbu062 2017-11-07 09:52

small fix

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sbu062 2017-11-07 09:47

added info on gpmatrix.tcl

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sbu062 2017-11-07 09:21 Rev.: 6161

commondata: GA parameters public

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sbu062 2017-11-07 09:19

(life_cycles_DEBUG_TEST): isolated to an external procedure file

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sbu062 2017-11-07 09:19 Rev.: 6158

commondata: GA parameters public

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sbu062 2017-11-06 22:39 Rev.: 6157

merged from HEDG2_02: added Tk Gui

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sbu062 2017-11-06 22:35 Rev.: 6156

no horizontal scroll

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sbu062 2017-11-06 22:35 Rev.: 6155

added scrollbar

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sbu062 2017-11-06 22:35 Rev.: 6154

added Tk GUI

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sbu062 2017-11-06 14:52

set model name in doxy

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sbu062 2017-11-06 14:08 Rev.: 6151

run: normal mode, full popsize 10,000, preevol steps adaptive, full behaviour selection

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sbu062 2017-11-06 14:02 Rev.: 6150

run: force fixed steps, EATONLY

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sbu062 2017-11-06 13:55 Rev.: 6149

run: force fixed steps, full behaviour selection

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sbu062 2017-11-06 13:55 Rev.: 6148

(preevol_steps_adaptive): implemented fixed preevol time steps switch for debugging/testing

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sbu062 2017-11-06 13:25 Rev.: 6147

run: reduced popsize to 5,000

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sbu062 2017-11-06 13:23 Rev.: 6146

(condition_init_genotype): non-genetic Gaussian energy reserves and body length

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sbu062 2017-11-06 12:31 Rev.: 6145

merged HEDG2_01 after major reorganization of the code: files separate for modules now

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sbu062 2017-11-06 12:19 Rev.: 6144

fix name

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sbu062 2017-11-06 12:18 Rev.: 6143

small update

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sbu062 2017-11-06 12:11 Rev.: 6142

major reorganization of the code: updated head matters for source files

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sbu062 2017-11-06 11:52 Rev.: 6141

MAJOR reorganization of the code: split files into separate modules, updated Makefiles and pfunit

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sbu062 2017-11-06 00:34

gpmatrix.tcl: small reformat

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sbu062 2017-11-06 00:34 Rev.: 6137

added tcl script to template genotype x phenotype matrix code

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sbu062 2017-11-06 00:34 Rev.: 6136

(population_ga_mutation_rate_adaptive): based on N alive, N growing deteriorates GA too quick

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sbu062 2017-11-06 00:34 Rev.: 6135

(fitness_food_mass_sum): increased fitness multiplier, highest fitness was zero with poor resolution in run on F5

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sbu062 2017-11-03 15:36 Rev.: 6134

adde hg to install script

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sbu062 2017-11-03 14:31 Rev.: 6133

(individual_preevol_fitness_calc): use fitness based on absolute diff with birth mass

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sbu062 2017-11-03 14:31 Rev.: 6132

(individual_preevol_fitness_calc): fitness based on absolute diff with birth mass

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doc: small reformat

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sbu062 2017-11-03 14:31 Rev.: 6130

doc: small change

1 lines of code changed in 1 file:

sbu062 2017-11-03 13:38 Rev.: 6129

further reduced reproductive factor abscissa, for low growth, (a) 1/10 (b) * 3

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sbu062 2017-11-03 13:38 Rev.: 6128

(individual_preevol_fitness_calc): fitness based on reproductive factor

19 lines of code changed in 1 file:

sbu062 2017-11-03 10:04 Rev.: 6127

added hg commands to initial clone

5 lines of code changed in 1 file:

sbu062 2017-11-03 09:22 Rev.: 6126

(generations_loop_ga): ga deterioration criterion relaxed, 2/3 of init growing to allow wide fluctuations

1 lines of code changed in 1 file:

sbu062 2017-11-03 09:22 Rev.: 6125

small revisions logger

8 lines of code changed in 1 file:

sbu062 2017-11-03 07:55 Rev.: 6124

normal lifecycle restored

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sbu062 2017-11-03 07:51 Rev.: 6123

run: Farm 003: run EATONLY with normal population POPSIZE 10,000

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sbu062 2017-11-03 07:40 Rev.: 6122

(generations_loop_ga): more logging

5 lines of code changed in 1 file:

sbu062 2017-11-02 19:01 Rev.: 6121

run: normal lifecycle restored

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sbu062 2017-11-02 19:00 Rev.: 6120

run: Farm 003: run EATONLY with normal population POPSIZE 10,000

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sbu062 2017-11-02 18:55 Rev.: 6119

(generations_loop_ga): comments

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sbu062 2017-11-02 18:55 Rev.: 6118

(generations_loop_ga): reuse n_alive and n_growing, still recalculate in (generation_stats_record_write)

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sbu062 2017-11-02 18:54 Rev.: 6117

(generations_loop_ga): fixed non-advancing beyond gen.1, moved condition to a separate block before generation pointers are swapped

30 lines of code changed in 1 file:

sbu062 2017-11-02 14:43 Rev.: 6116

normal lifecycle restored

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sbu062 2017-11-02 14:41 Rev.: 6115

run: Farm 003: run EATONLY with normal population POPSIZE 10,000

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sbu062 2017-11-02 14:39 Rev.: 6114

(generations_loop_ga): fix non-advancing beyond generation 1, allow equal

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sbu062 2017-11-02 14:39 Rev.: 6113

(generations_loop_ga): comments updated

7 lines of code changed in 1 file:

sbu062 2017-11-02 12:23 Rev.: 6112

normal lifecycle restored

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sbu062 2017-11-02 12:22 Rev.: 6111

run: Farm 003: run EATONLY with normal population POPSIZE 10000

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sbu062 2017-11-02 12:21 Rev.: 6110

(generations_loop_ga): fixed stopping rule parameters based on the first generation, initialised with sensible start values. They are also moved to local in THE_EVOLUTION module

36 lines of code changed in 1 file:

sbu062 2017-11-02 11:08 Rev.: 6109

normal lifecycle restored

2 lines of code changed in 1 file:

sbu062 2017-11-02 11:06 Rev.: 6108

run: Farm 003: run EATONLY with normal population POPSIZE 10000

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sbu062 2017-11-02 10:55 Rev.: 6107

reduced food availability in safe habitat

1 lines of code changed in 1 file:

sbu062 2017-11-02 10:55 Rev.: 6106

(generations_loop_ga): reiimplemented stopping rule for the evolution, now based on generation one parameters: N alive and N wrowing

33 lines of code changed in 1 file:

sbu062 2017-11-02 10:55 Rev.: 6105

(generations_loop_ga): fixed evolution stopping rule: code reformat

2 lines of code changed in 1 file:

sbu062 2017-11-02 10:55 Rev.: 6104

(generations_loop_ga): fixed and refined stopping rules to avoid too long futile evolution

19 lines of code changed in 1 file:

sbu062 2017-11-01 15:50 Rev.: 6103

restored svn 6099 hg 3853

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sbu062 2017-11-01 15:44 Rev.: 6102

run: fixed number of steps 140: fixed wrong placement

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sbu062 2017-11-01 15:39 Rev.: 6101

run: fixed number of steps 140

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sbu062 2017-11-01 15:26 Rev.: 6100

run: increased starting number of time steps to 0.8 cycles, all other fixed also

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sbu062 2017-11-01 14:38 Rev.: 6099

run: increased starting number of time steps from one cycle to 0.3 of full cycles

1 lines of code changed in 1 file:

sbu062 2017-11-01 14:38 Rev.: 6098

run: EATONLY disabled: normal mode

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sbu062 2017-11-01 14:14 Rev.: 6097

run: run EATONLY with normal population POPSIZE 10000

2 lines of code changed in 1 file:

sbu062 2017-11-01 14:01 Rev.: 6096

zipdata also collects auto-compressed gz files

1 lines of code changed in 1 file:

sbu062 2017-11-01 13:58 Rev.: 6095

(population_ga_mutation_rate_adaptive): fixed base point reflecting N grown; (preevol_steps_adaptive): interpolation plot code for higher start n of steps, example only

12 lines of code changed in 2 files:

sbu062 2017-11-01 12:33 Rev.: 6094

added performance benchmark report link

4 lines of code changed in 1 file:

October 2017 »

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