July 2017 Commit Log

Number of Commits:
446
Number of Active Developers:
2
sbu062 2017-07-31 12:33 Rev.: 4708

tests: renames

14 lines of code changed in 4 files:

sbu062 2017-07-31 12:04 Rev.: 4707

doc: small fix

2 lines of code changed in 2 files:

sbu062 2017-07-31 11:44 Rev.: 4706

added svn properties

1 lines of code changed in 1 file:

sbu062 2017-07-31 11:39 Rev.: 4705

main driver isolated for possible unit tests

10 lines of code changed in 1 file:

sbu062 2017-07-31 11:19 Rev.: 4704

doc: small fixes

5 lines of code changed in 2 files:

sbu062 2017-07-31 11:10 Rev.: 4703

deleted debug code

0 lines of code changed in 1 file:

sbu062 2017-07-31 11:10 Rev.: 4702

main program is now 'driver' in separate file

39 lines of code changed in 2 files:

sbu062 2017-07-31 11:10 Rev.: 4701

fixed OBJ for multiple sources, use GNU make basename function rather than external shell command (object suffix was only appended for the last file before)

4 lines of code changed in 1 file:

cje012 2017-07-31 07:57 Rev.: 4700

Added use folderpath as folder.f90 is now turned into a module. This makes the code almost identical to the general binary_IO module, and makes it easier to maintain both of them with minor differences.

23 lines of code changed in 1 file:

cje012 2017-07-31 07:55 Rev.: 4699

Added folder.f90 as it is turned into a module and therefore need to be compiled as such.

1 lines of code changed in 1 file:

cje012 2017-07-31 07:54 Rev.: 4698

Now turned into a module as it makes it easier to work with the general binary_IO module without to many changes.

4 lines of code changed in 1 file:

sbu062 2017-07-30 07:56 Rev.: 4697

tests: test sources isolated

4 lines of code changed in 1 file:

sbu062 2017-07-29 21:02 Rev.: 4696

tests: updated main readme

1 lines of code changed in 1 file:

sbu062 2017-07-29 20:58 Rev.: 4695

tests: added readme

15 lines of code changed in 1 file:

sbu062 2017-07-29 20:45 Rev.: 4694

rudimentary unit tests using pFUnit

113 lines of code changed in 4 files:

sbu062 2017-07-29 20:45 Rev.: 4693

tests now used for unit tests with pfunit

1 lines of code changed in 1 file:

sbu062 2017-07-29 20:45 Rev.: 4692

added 'objects'-only target for tests

5 lines of code changed in 1 file:

sbu062 2017-07-29 09:48 Rev.: 4691

cleanup: skeleton note

1 lines of code changed in 1 file:

sbu062 2017-07-29 09:47 Rev.: 4690

cleanup: deleted some unused obsolete variables

3 lines of code changed in 1 file:

sbu062 2017-07-29 09:47 Rev.: 4689

cleanup: simplified nested logical expressioins

10 lines of code changed in 1 file:

sbu062 2017-07-29 09:46 Rev.: 4688

cleanup: deleted unused variables

0 lines of code changed in 1 file:

sbu062 2017-07-28 07:15 Rev.: 4687

cleanup strings: added explicit type declarations for all undeclared integers

36 lines of code changed in 1 file:

sbu062 2017-07-28 05:49 Rev.: 4686

(consp_select_nearest): done

25 lines of code changed in 1 file:

sbu062 2017-07-27 19:40 Rev.: 4685

doc: small fix

2 lines of code changed in 1 file:

sbu062 2017-07-27 19:35 Rev.: 4684

doc: coding standards

17 lines of code changed in 1 file:

sbu062 2017-07-23 19:00 Rev.: 4683

doc: fixed wrong diamond direction at UML

3921 lines of code changed in 3 files:

sbu062 2017-07-23 12:34 Rev.: 4682

doc: fixed wrong diamond direction at UML

46 lines of code changed in 3 files:

sbu062 2017-07-23 09:48 Rev.: 4681

doc: size

151 lines of code changed in 3 files:

sbu062 2017-07-23 09:41 Rev.: 4680

doc: fixed wrong diamond direction at UML

5898 lines of code changed in 9 files:

sbu062 2017-07-22 12:02 Rev.: 4679

doc: anchor in sysinit obsolete

2 lines of code changed in 1 file:

sbu062 2017-07-22 10:18 Rev.: 4678

doc: debug mode main in head doc fix

0 lines of code changed in 1 file:

sbu062 2017-07-22 09:56 Rev.: 4677

doc: debug mode main in head doc

5 lines of code changed in 1 file:

sbu062 2017-07-22 09:49 Rev.: 4676

doc: section on debug mode

39 lines of code changed in 1 file:

sbu062 2017-07-22 09:37 Rev.: 4675

doc: renames anchor

8 lines of code changed in 1 file:

sbu062 2017-07-22 09:29 Rev.: 4674

doc: fix anchor

1 lines of code changed in 1 file:

sbu062 2017-07-22 09:15 Rev.: 4673

doc: added ref to DEBUG mode "@ref info_debug "DEBUG mode""

7 lines of code changed in 1 file:

sbu062 2017-07-22 09:03 Rev.: 4672

doc: focal fish red

1779 lines of code changed in 3 files:

sbu062 2017-07-21 21:21 Rev.: 4671

doc: fix scheme

2929 lines of code changed in 3 files:

sbu062 2017-07-21 21:03

fix eps

847 lines of code changed in 2 files:

sbu062 2017-07-21 18:18 Rev.: 4668

rescale 500

175 lines of code changed in 1 file:

sbu062 2017-07-21 17:02 Rev.: 4667

doc: small fix typo

1 lines of code changed in 1 file:

sbu062 2017-07-21 16:57 Rev.: 4666

(behaviour_select_food_item): use tags in logging

7 lines of code changed in 1 file:

sbu062 2017-07-21 16:53 Rev.: 4665

(behaviour_select_food_item): formula obsolete as weighting by subjective probability disabled earlier today

7 lines of code changed in 1 file:

sbu062 2017-07-21 16:11 Rev.: 4664

(behaviour_select_conspecific): renamed vars

10 lines of code changed in 1 file:

sbu062 2017-07-21 14:50 Rev.: 4663

(behaviour_select_conspecific): public interface

4 lines of code changed in 1 file:

sbu062 2017-07-21 14:50 Rev.: 4662

(behaviour_select_conspecific): fully implemented

11 lines of code changed in 1 file:

sbu062 2017-07-21 14:50 Rev.: 4661

(behaviour_select_conspecific): continue

100 lines of code changed in 1 file:

sbu062 2017-07-21 14:22 Rev.: 4660

(behaviour_select_conspecific): initial skeleton

17 lines of code changed in 1 file:

sbu062 2017-07-21 14:10 Rev.: 4659

doc: refs for overview of behavioural repertoire

6 lines of code changed in 1 file:

sbu062 2017-07-21 13:58 Rev.: 4658

doc: move up scheme

2 lines of code changed in 1 file:

sbu062 2017-07-21 13:55 Rev.: 4657

doc: small fix

2 lines of code changed in 1 file:

sbu062 2017-07-21 13:48 Rev.: 4656

scale 400

10 lines of code changed in 1 file:

sbu062 2017-07-21 13:46 Rev.: 4655

doc: narrower plot in latex

1 lines of code changed in 1 file:

sbu062 2017-07-21 13:45 Rev.: 4654

scale 300

12 lines of code changed in 1 file:

sbu062 2017-07-21 13:41 Rev.: 4653

scale 500

1178 lines of code changed in 1 file:

sbu062 2017-07-21 13:36 Rev.: 4652

doc: added behavioural repertoire diagram

2 lines of code changed in 1 file:

sbu062 2017-07-21 13:36 Rev.: 4651

class diagram for behaviour

2814 lines of code changed in 3 files:

sbu062 2017-07-21 13:00

doc: added general info on behaviour

34 lines of code changed in 2 files:

sbu062 2017-07-21 12:46 Rev.: 4648

doc: small fix

2 lines of code changed in 1 file:

sbu062 2017-07-21 12:43 Rev.: 4647

doc: started general info on behaviour

26 lines of code changed in 1 file:

sbu062 2017-07-21 12:09 Rev.: 4646

(LOG_DBG): deleted extra tags

3 lines of code changed in 1 file:

sbu062 2017-07-21 11:27 Rev.: 4645

use LTAG_'s

5 lines of code changed in 1 file:

sbu062 2017-07-21 11:27 Rev.: 4644

(behaviour_select_food_item): disable weighting by subjective probability, it is done in (do_this)

7 lines of code changed in 1 file:

sbu062 2017-07-21 09:55 Rev.: 4643

doc: doxy fix cleanup

20 lines of code changed in 1 file:

sbu062 2017-07-21 09:47

doc: doxy fix cleanup

53 lines of code changed in 2 files:

sbu062 2017-07-21 09:38 Rev.: 4640

doc: doxy fix cleanup

23 lines of code changed in 1 file:

sbu062 2017-07-21 09:29 Rev.: 4639

doc: doxy fix cleanup

32 lines of code changed in 1 file:

sbu062 2017-07-21 09:19 Rev.: 4638

doc: doxy fix cleanup

11 lines of code changed in 1 file:

sbu062 2017-07-21 09:11 Rev.: 4637

doc: doxy fix cleanup

27 lines of code changed in 1 file:

sbu062 2017-07-21 08:59 Rev.: 4636

doc: small fix

0 lines of code changed in 1 file:

sbu062 2017-07-21 08:55

doc: doxy fix cleanup

24 lines of code changed in 2 files:

sbu062 2017-07-21 05:20 Rev.: 4633

doc: small fix

1 lines of code changed in 1 file:

sbu062 2017-07-21 05:14

doc: doxy cleanup for (appraisal_perceptual_comps_motiv_neur_response_calculate)

35 lines of code changed in 2 files:

sbu062 2017-07-20 20:47 Rev.: 4630

doc: small fix

6 lines of code changed in 1 file:

sbu062 2017-07-20 19:28 Rev.: 4629

doc: small fix

1 lines of code changed in 1 file:

sbu062 2017-07-20 18:48 Rev.: 4628

(approach_do_this): fixes for the case when the agent is already in proximity of the target object

48 lines of code changed in 1 file:

sbu062 2017-07-20 18:48 Rev.: 4627

(approach_do_this): small fix

1 lines of code changed in 1 file:

sbu062 2017-07-20 18:48 Rev.: 4626

(approach_do_this): check proximity, if target object is closer than offset

48 lines of code changed in 1 file:

sbu062 2017-07-20 18:47 Rev.: 4625

small code reformat

2 lines of code changed in 1 file:

sbu062 2017-07-20 18:47 Rev.: 4624

doc: fix doc for interface approach (execute)

4 lines of code changed in 1 file:

sbu062 2017-07-20 18:47 Rev.: 4623

doc: added note on init proc

6 lines of code changed in 1 file:

sbu062 2017-07-20 18:47 Rev.: 4622

doc: added warning on init proc

4 lines of code changed in 1 file:

sbu062 2017-07-20 14:46 Rev.: 4621

impure keyword from f2008: compatibility issues

8 lines of code changed in 1 file:

sbu062 2017-07-20 14:30 Rev.: 4620

doc: add note

3 lines of code changed in 1 file:

sbu062 2017-07-20 14:25 Rev.: 4619

doc: doxy fix

4 lines of code changed in 1 file:

sbu062 2017-07-20 14:15 Rev.: 4618

doc: note on (execute) method for approach_conspec

2 lines of code changed in 1 file:

sbu062 2017-07-20 14:15 Rev.: 4617

approach_do_execute: set default target offset for generic methos, also approach_conspec

16 lines of code changed in 1 file:

sbu062 2017-07-20 13:36 Rev.: 4616

doc: doxy fixes

3 lines of code changed in 1 file:

sbu062 2017-07-20 13:30 Rev.: 4615

doc ref tag works

5 lines of code changed in 1 file:

sbu062 2017-07-20 12:58 Rev.: 4614

doc: test ref toi module

1 lines of code changed in 1 file:

sbu062 2017-07-20 12:52 Rev.: 4613

doc: doxy fixes for (perception_components_neuronal_response_init_set)

5 lines of code changed in 1 file:

sbu062 2017-07-20 12:48 Rev.: 4612

doc: doxy cleanup for (perception_components_neuronal_response_init_set)

122 lines of code changed in 1 file:

sbu062 2017-07-20 12:18 Rev.: 4611

doc: doxy fixes to (perception_components_neuronal_response_calculate)

5 lines of code changed in 1 file:

sbu062 2017-07-20 12:05

doc: doxy fixes to (perception_components_neuronal_response_calculate)

62 lines of code changed in 3 files:

sbu062 2017-07-20 11:59 Rev.: 4607

doc: doxy fixes to (perception_components_neuronal_response_calculate)

18 lines of code changed in 1 file:

sbu062 2017-07-20 11:50 Rev.: 4606

(perception_components_neuronal_response_calculate): cleanup doxygen and parameters

108 lines of code changed in 1 file:

sbu062 2017-07-20 11:03 Rev.: 4605

doc: anchor renders better than section

2 lines of code changed in 1 file:

sbu062 2017-07-20 10:39 Rev.: 4604

doc: section

1 lines of code changed in 1 file:

sbu062 2017-07-20 10:35 Rev.: 4603

doc: ref to full list of perception overrides

4 lines of code changed in 1 file:

sbu062 2017-07-20 09:53 Rev.: 4602

doc: examples of tags and refs in head

9 lines of code changed in 1 file:

sbu062 2017-07-20 09:53 Rev.: 4601

doc: added global list of perception overrides

17 lines of code changed in 1 file:

sbu062 2017-07-20 09:53 Rev.: 4600

(approach_conspecifics_motivations_expect): procedure now ready

46 lines of code changed in 1 file:

sbu062 2017-07-20 09:01

doc: small fix

8 lines of code changed in 2 files:

sbu062 2017-07-19 21:03 Rev.: 4597

doc: food is spatial_moving class long ago

6283 lines of code changed in 6 files:

sbu062 2017-07-19 20:37 Rev.: 4596

(approach_conspecifics_motivations_expect): better stub for direct food

1 lines of code changed in 1 file:

sbu062 2017-07-19 20:37 Rev.: 4595

doc: reformat

6 lines of code changed in 1 file:

sbu062 2017-07-19 19:09 Rev.: 4594

doc: reformat

8 lines of code changed in 1 file:

sbu062 2017-07-19 18:12 Rev.: 4593

doc: small changes

3 lines of code changed in 1 file:

sbu062 2017-07-19 15:59 Rev.: 4592

(walk_random_do_this): fix line

1 lines of code changed in 1 file:

sbu062 2017-07-19 15:56 Rev.: 4591

doc: more description

9 lines of code changed in 1 file:

sbu062 2017-07-19 15:56 Rev.: 4590

doc:: hope function plot deleted

0 lines of code changed in 1 file:

sbu062 2017-07-19 15:56 Rev.: 4589

(walk_random_do_this): algorithm for calculating expected food gain based on hope function done

94 lines of code changed in 1 file:

sbu062 2017-07-19 15:32 Rev.: 4588

(walk_random_do_this): selector for hope- and perception based expected food gain

77 lines of code changed in 1 file:

sbu062 2017-07-19 15:32 Rev.: 4587

(walk_random_do_this): move calc. food items perception above expected food gain

36 lines of code changed in 1 file:

sbu062 2017-07-19 15:02 Rev.: 4586

doc: small note

2 lines of code changed in 1 file:

sbu062 2017-07-19 14:49 Rev.: 4585

doc: old inline formula disabled

6 lines of code changed in 1 file:

sbu062 2017-07-19 14:46 Rev.: 4584

doc: added preformatted matrix formula

1158 lines of code changed in 3 files:

sbu062 2017-07-19 14:36 Rev.: 4583

doc: reformat

8 lines of code changed in 1 file:

sbu062 2017-07-19 14:31 Rev.: 4582

walk_random class: added expected_food_dir perception based on (hope)

91 lines of code changed in 1 file:

sbu062 2017-07-19 13:15 Rev.: 4581

doc: fix doxy formula

302 lines of code changed in 3 files:

sbu062 2017-07-19 13:08 Rev.: 4580

migrate class: added expected_food_dir perception, fix (expectancies_calculate)

15 lines of code changed in 1 file:

sbu062 2017-07-19 13:08 Rev.: 4579

migrate class: added expected_food_dir perception, fix (init) and (do)

26 lines of code changed in 1 file:

sbu062 2017-07-19 13:08 Rev.: 4578

(approach_conspecifics_motivations_expect): continue

147 lines of code changed in 1 file:

sbu062 2017-07-19 13:08 Rev.: 4577

(approach_conspecifics_motivations_expect): continue, added time step param in approach to allow procedure override

52 lines of code changed in 1 file:

sbu062 2017-07-19 13:08 Rev.: 4576

(get_prop_...) functions for polymorphic spatial objects, size and mass

93 lines of code changed in 1 file:

sbu062 2017-07-19 13:08 Rev.: 4575

doc: more notes

1 lines of code changed in 1 file:

sbu062 2017-07-18 16:48 Rev.: 4574

(reproduce_do_execute): todo

2 lines of code changed in 1 file:

sbu062 2017-07-18 16:48 Rev.: 4573

(reproduce_do_execute): more logging

3 lines of code changed in 1 file:

sbu062 2017-07-18 16:47 Rev.: 4572

doc: small code reformat

6 lines of code changed in 1 file:

sbu062 2017-07-18 14:32 Rev.: 4571

(approach_conspecifics_motivations_expect): public interface

7 lines of code changed in 1 file:

sbu062 2017-07-18 14:32 Rev.: 4570

(approach_conspecifics_motivations_expect): initial skeleton from approach class

284 lines of code changed in 1 file:

sbu062 2017-07-18 14:32 Rev.: 4569

(approach_conspecifics_do_this): small code format; procedure now ready

0 lines of code changed in 1 file:

sbu062 2017-07-18 14:21 Rev.: 4568

doc: fix note

7 lines of code changed in 1 file:

sbu062 2017-07-18 14:03 Rev.: 4567

doc: fix note

2 lines of code changed in 1 file:

sbu062 2017-07-18 13:57 Rev.: 4566

doc: more notes

8 lines of code changed in 1 file:

sbu062 2017-07-18 13:57 Rev.: 4565

doc: added plot of nonparametric function for food gain expectancy

3720 lines of code changed in 3 files:

sbu062 2017-07-18 13:34 Rev.: 4564

doc: more notes

9 lines of code changed in 1 file:

sbu062 2017-07-18 13:34 Rev.: 4563

(approach_conspecifics_do_this): expected food gain added, calculation procedures implemented

79 lines of code changed in 1 file:

sbu062 2017-07-18 12:00 Rev.: 4562

(pproach_conspecifics_do_this): expected predation when no predators in perception; extended if block 'NO_PREDATORS'

159 lines of code changed in 1 file:

sbu062 2017-07-18 12:00 Rev.: 4561

(pproach_conspecifics_do_this): started food gain expectancy

26 lines of code changed in 1 file:

sbu062 2017-07-18 10:21 Rev.: 4560

(pproach_conspecifics_do_this): general risk of predation diluted

14 lines of code changed in 1 file:

sbu062 2017-07-18 10:04 Rev.: 4559

doc: small fix

4 lines of code changed in 1 file:

sbu062 2017-07-18 09:59 Rev.: 4558

doc: small fix

2 lines of code changed in 1 file:

sbu062 2017-07-18 09:55 Rev.: 4557

doc: fixh check dosy image disappears

1 lines of code changed in 1 file:

sbu062 2017-07-18 09:53 Rev.: 4556

doc: small fix

2 lines of code changed in 1 file:

sbu062 2017-07-18 09:50 Rev.: 4555

doc: direct expected predation risks logged in debug mode

5046 lines of code changed in 2 files:

sbu062 2017-07-18 09:31 Rev.: 4554

doc: target offset is Delta

313 lines of code changed in 4 files:

sbu062 2017-07-18 09:22 Rev.: 4553

doc: fix scheme

2967 lines of code changed in 3 files:

sbu062 2017-07-18 09:12 Rev.: 4552

doc: format code only

11 lines of code changed in 1 file:

sbu062 2017-07-18 09:12 Rev.: 4551

(approach_conspecifics_do_this): shorter name for expected risk

5 lines of code changed in 1 file:

sbu062 2017-07-18 09:11 Rev.: 4550

(approach_conspecifics_do_this): expected risk for predators is now array

13 lines of code changed in 1 file:

sbu062 2017-07-18 09:11 Rev.: 4549

doc: fix

6 lines of code changed in 1 file:

sbu062 2017-07-17 23:28 Rev.: 4548

doc: fix

10 lines of code changed in 1 file:

sbu062 2017-07-17 23:18 Rev.: 4547

doc: fix schemes

618 lines of code changed in 3 files:

sbu062 2017-07-17 23:16 Rev.: 4546

doc: mode explanations

15 lines of code changed in 1 file:

sbu062 2017-07-17 23:06 Rev.: 4545

doc: fix

1029 lines of code changed in 3 files:

sbu062 2017-07-17 23:03 Rev.: 4544

doc: extension

1 lines of code changed in 1 file:

sbu062 2017-07-17 23:02 Rev.: 4543

doc: added schemes

3411 lines of code changed in 4 files:

sbu062 2017-07-17 23:02 Rev.: 4542

doc: small changes

1 lines of code changed in 1 file:

sbu062 2017-07-17 19:38 Rev.: 4541

doc: small changes

3 lines of code changed in 1 file:

sbu062 2017-07-17 19:38 Rev.: 4540

doc: bold better

1 lines of code changed in 1 file:

sbu062 2017-07-17 19:29 Rev.: 4539

doc: close list

1 lines of code changed in 1 file:

sbu062 2017-07-17 19:23 Rev.: 4538

(approach_conspecifics_do_this): continue, did direct predation risk

105 lines of code changed in 1 file:

sbu062 2017-07-17 14:49

(approach_conspecifics_do_this): continue

166 lines of code changed in 2 files:

sbu062 2017-07-14 13:00 Rev.: 4535

(approach_conspecifics_do_this): continue

27 lines of code changed in 1 file:

sbu062 2017-07-14 12:17 Rev.: 4534

doc: small changes to check

4 lines of code changed in 1 file:

sbu062 2017-07-14 12:14 Rev.: 4533

doc: link to proc

1 lines of code changed in 1 file:

sbu062 2017-07-14 12:01 Rev.: 4532

(approach_conspecifics_do_this): continue

65 lines of code changed in 1 file:

sbu062 2017-07-14 12:01

(approach_conspecifics_do_this): additional debug logging

13 lines of code changed in 2 files:

sbu062 2017-07-13 14:44 Rev.: 4529

(approach_conspecifics_do_this): distance to undefined target is still known

1 lines of code changed in 1 file:

sbu062 2017-07-13 14:38 Rev.: 4528

doc: fix warning

3 lines of code changed in 1 file:

sbu062 2017-07-13 14:35 Rev.: 4527

doc: fix end of warning

4 lines of code changed in 1 file:

sbu062 2017-07-13 14:33 Rev.: 4526

doc: wrong end of note

1 lines of code changed in 1 file:

sbu062 2017-07-13 14:22 Rev.: 4525

(approach_conspecifics_do_this): continue, get terget object properties

53 lines of code changed in 1 file:

sbu062 2017-07-13 14:22 Rev.: 4524

test code for 'select type'

4 lines of code changed in 1 file:

sbu062 2017-07-13 14:22 Rev.: 4523

(approach_conspecifics_do_this): test code for determining type

12 lines of code changed in 1 file:

sbu062 2017-07-13 14:22 Rev.: 4522

(approach_conspecifics_do_this): minor adaptations and public interface

9 lines of code changed in 1 file:

sbu062 2017-07-13 14:22 Rev.: 4521

(approach_conspecifics_do_this): initial skeleton for 'approach_conspecifics' class

98 lines of code changed in 1 file:

sbu062 2017-07-13 10:39 Rev.: 4520

doc: small note on optional environments_array in (find_environment) method

7 lines of code changed in 1 file:

sbu062 2017-07-13 10:10 Rev.: 4519

doc: add method

6 lines of code changed in 1 file:

sbu062 2017-07-13 10:05 Rev.: 4518

rename public interfaces, better readability with underscore

2 lines of code changed in 1 file:

sbu062 2017-07-13 10:02 Rev.: 4517

(spatial_moving_go_down): public interface; xif doxy comments

7 lines of code changed in 1 file:

sbu062 2017-07-13 10:02 Rev.: 4516

(spatial_moving_go_down): implemented (godown) descend method for spatial_moving object

61 lines of code changed in 1 file:

sbu062 2017-07-13 10:02 Rev.: 4515

array rwalk procedures: 'select type' constructs invoke FOOD_ITEM class not type

4 lines of code changed in 1 file:

sbu062 2017-07-13 10:02 Rev.: 4514

(spatial_moving_go_up) invoke 'select type' construct for FOOD_ITEM class to ascend only 'available' foor items

16 lines of code changed in 1 file:

sbu062 2017-07-13 09:33 Rev.: 4513

(spatial_moving_go_up) is now elemental, (min_depth) and (max_depth) converted to elemental, corners offset method is now pure

8 lines of code changed in 1 file:

sbu062 2017-07-13 08:41 Rev.: 4512

(spatial_moving_go_up): (goup) method, did docs, added public interface

10 lines of code changed in 1 file:

sbu062 2017-07-13 08:41 Rev.: 4511

(spatial_moving_go_up): (ascend) method initial implementation

46 lines of code changed in 1 file:

sbu062 2017-07-12 23:46 Rev.: 4510

doc: deleted obsolete note

3 lines of code changed in 1 file:

sbu062 2017-07-12 23:40 Rev.: 4509

doc: array-based random walk routines can do arbitrary number of steps

8 lines of code changed in 1 file:

sbu062 2017-07-12 23:22 Rev.: 4508

(spatial_moving_array_rwalk25d_all_step) and (spatial_moving_array_rwalk3d_all_step): shorter names because they are no type-bound and have no public names

4 lines of code changed in 1 file:

sbu062 2017-07-12 23:22 Rev.: 4507

(spatial_moving_array_rwalk25d_all_step): use select type for food items, checking if they are eaten while random walk

71 lines of code changed in 1 file:

sbu062 2017-07-12 23:22 Rev.: 4506

(spatial_moving_array_rwalk3d_all_step): use select type for food items, checking if they are eaten while random walk

59 lines of code changed in 1 file:

sbu062 2017-07-12 22:45 Rev.: 4505

reduced HISTORY_SIZE_SPATIAL to save memory

1 lines of code changed in 1 file:

sbu062 2017-07-12 22:42 Rev.: 4504

food_item now spatial_moving: cleanup history stack on (create) and (make)

8 lines of code changed in 1 file:

sbu062 2017-07-12 22:42 Rev.: 4503

food_item redeclared spatial_moving

1 lines of code changed in 1 file:

sbu062 2017-07-12 20:20 Rev.: 4502

doc: rearrange

4 lines of code changed in 1 file:

sbu062 2017-07-12 20:20 Rev.: 4501

doc: deleted extra whitespace only

0 lines of code changed in 1 file:

sbu062 2017-07-12 20:19 Rev.: 4500

doc: 2.5D version note

2 lines of code changed in 1 file:

sbu062 2017-07-12 20:19 Rev.: 4499

doc: deleted extra whitespace only

0 lines of code changed in 1 file:

sbu062 2017-07-12 20:19 Rev.: 4498

CV_DEFAULT is parameter, forgotten

2 lines of code changed in 1 file:

sbu062 2017-07-12 20:19 Rev.: 4497

doc: deleted extra whitespace only

0 lines of code changed in 1 file:

sbu062 2017-07-12 20:19 Rev.: 4496

(spatial_moving_array_rwalk25d_all_step): implemented random walk(s) for an array of spatial_moving agents, so far 3D version

167 lines of code changed in 1 file:

sbu062 2017-07-12 20:19 Rev.: 4495

(spatial_moving_array_rwalk3d_all_step): implemented random walk(s) for an array of spatial_moving agents, so far 3D version

136 lines of code changed in 1 file:

sbu062 2017-07-12 18:34 Rev.: 4494

doc: delete obsolete todo

1 lines of code changed in 1 file:

sbu062 2017-07-12 18:29 Rev.: 4493

doc: cleanup doxy comments

27 lines of code changed in 1 file:

sbu062 2017-07-12 18:21 Rev.: 4492

(population_rwalk25d_all_agents_step) fix environment limits call object

2 lines of code changed in 1 file:

sbu062 2017-07-12 18:21 Rev.: 4491

(population_rwalk25d_all_agents_step) default environment limits from global array; updated interface parameter docs for all affected procs

13 lines of code changed in 1 file:

sbu062 2017-07-12 18:21 Rev.: 4490

(escape_dart_do_execute) default environment limite from global array in (corwalk) call too

3 lines of code changed in 1 file:

sbu062 2017-07-12 18:20 Rev.: 4489

(population_rwalk3d_all_agents_step) default environment limits now get values from global array

9 lines of code changed in 1 file:

sbu062 2017-07-12 18:20 Rev.: 4488

(escape_dart_do_execute) default environment limits now get values from global array

10 lines of code changed in 1 file:

sbu062 2017-07-12 17:45 Rev.: 4487

(walk_random_do_execute) default environment limits now get values from global array

7 lines of code changed in 1 file:

sbu062 2017-07-12 17:45 Rev.: 4486

doc: more doxy docs

7 lines of code changed in 1 file:

sbu062 2017-07-11 21:43 Rev.: 4485

doc: small fixes; (approach_do_execute) now ready

4 lines of code changed in 1 file:

sbu062 2017-07-11 21:43 Rev.: 4484

doc: small fix

1 lines of code changed in 1 file:

sbu062 2017-07-11 17:58 Rev.: 4483

doc: small reformat in (execute)

10 lines of code changed in 1 file:

sbu062 2017-07-11 17:49 Rev.: 4482

(execute) method for approach class: additional debug logging, added another temporay spatial object to keep position with offset

10 lines of code changed in 1 file:

sbu062 2017-07-11 17:48 Rev.: 4481

(execute) method for approach class: check if the approach distance exceeds he maximum limit, reduce this%distance accordingly; more debugging log output for

28 lines of code changed in 1 file:

sbu062 2017-07-11 17:48 Rev.: 4480

fixed doxy plot for (offset_dist)

186 lines of code changed in 3 files:

sbu062 2017-07-11 16:02 Rev.: 4479

(offset_dist): renamed (dist_offset), placed for use in approach (execute) method, debug code for (offset_dist) deleted

4 lines of code changed in 1 file:

sbu062 2017-07-11 16:02 Rev.: 4478

doc: small format fix doxy

20 lines of code changed in 1 file:

sbu062 2017-07-11 16:02 Rev.: 4477

(dist_offset): debug code

3 lines of code changed in 1 file:

sbu062 2017-07-11 15:35 Rev.: 4476

(dist_offset): function to calculate spatial point with a specific distance in 3D at offset, debug code added

846 lines of code changed in 4 files:

sbu062 2017-07-11 15:35 Rev.: 4475

doc: fix docs and reformats

30 lines of code changed in 1 file:

sbu062 2017-07-11 15:35 Rev.: 4474

APPROACH class: target offset is now also dynamic, set default by parameter

63 lines of code changed in 1 file:

sbu062 2017-07-11 15:35 Rev.: 4473

APPROACH class: spatial target for the class is now always dynamic, no static data component for simplicity

19 lines of code changed in 1 file:

sbu062 2017-07-11 15:35 Rev.: 4472

doc: small fixes

4 lines of code changed in 1 file:

sbu062 2017-07-11 15:35 Rev.: 4471

(approach_do_execute): flag to do random walk or direct approach

55 lines of code changed in 1 file:

sbu062 2017-07-11 15:35 Rev.: 4470

(approach_do_execute): public interface

3 lines of code changed in 1 file:

sbu062 2017-07-11 15:35 Rev.: 4469

(approach_do_execute): done wholly

140 lines of code changed in 1 file:

sbu062 2017-07-11 09:11 Rev.: 4468

doc: small fix

2 lines of code changed in 1 file:

sbu062 2017-07-11 08:35 Rev.: 4467

doc: documented how to set target object for approach

12 lines of code changed in 1 file:

sbu062 2017-07-10 20:22 Rev.: 4466

doc: fixd doxy comments

7 lines of code changed in 1 file:

sbu062 2017-07-10 20:22 Rev.: 4465

(distance_insert): obsolete deleted

4 lines of code changed in 1 file:

sbu062 2017-07-10 20:22 Rev.: 4464

(approach_motivations_expect): use inherent target object, parameter target is now optional

14 lines of code changed in 1 file:

sbu062 2017-07-10 20:22 Rev.: 4463

(approach_do_this) now use class-inherent target object, target parameter is optional to override

15 lines of code changed in 1 file:

sbu062 2017-07-10 20:22 Rev.: 4462

(approach_motivations_expect): public inerface (expectancies_calculate)

5 lines of code changed in 1 file:

sbu062 2017-07-10 20:22 Rev.: 4461

(approach_motivations_expect): time step not needed in approach, formatted code, (expectancies_calculate) is now ready

8 lines of code changed in 1 file:

sbu062 2017-07-10 20:22 Rev.: 4460

(approach_motivations_expect): whole implemented, simplistic approach only involves cost of moving expectancy with fake perceptions of body mass and energy reserves

229 lines of code changed in 1 file:

sbu062 2017-07-10 20:22 Rev.: 4459

(approach_motivations_expect): addition to do_this

40 lines of code changed in 1 file:

sbu062 2017-07-10 20:22 Rev.: 4458

(approach_do_this): time step not needed, deleted

1 lines of code changed in 1 file:

sbu062 2017-07-10 20:21 Rev.: 4457

(approach_motivations_expect): started skeleton

29 lines of code changed in 1 file:

sbu062 2017-07-10 18:32 Rev.: 4456

doc: note in (approach_do_this) on derived subtypes and further class components

12 lines of code changed in 1 file:

sbu062 2017-07-10 18:32 Rev.: 4455

(approach_do_this): deleted food gain, predation risk and conspeciffics, they are different in derived classes, will be defined in subclasses

0 lines of code changed in 1 file:

sbu062 2017-07-10 18:31 Rev.: 4454

(approach_do_this): continue skeleton, small addition

4 lines of code changed in 1 file:

sbu062 2017-07-10 18:31 Rev.: 4453

explicit named parameters in all calls to (cost_swim)

14 lines of code changed in 1 file:

sbu062 2017-07-10 18:31 Rev.: 4452

(approach_do_this): continue skeleton

62 lines of code changed in 1 file:

sbu062 2017-07-10 18:31 Rev.: 4451

(approach_do_this): started initial skeleton

53 lines of code changed in 1 file:

sbu062 2017-07-10 18:31 Rev.: 4450

(migrate_do_execute): debug log

3 lines of code changed in 1 file:

sbu062 2017-07-09 12:35 Rev.: 4449

doc: raise UML diagram limits

1 lines of code changed in 1 file:

sbu062 2017-07-09 12:29 Rev.: 4448

doc: try enabling caller graphs

1 lines of code changed in 1 file:

sbu062 2017-07-09 12:22 Rev.: 4447

doc: raise UML diagram limits

3 lines of code changed in 1 file:

sbu062 2017-07-09 09:59 Rev.: 4446

doc: format fix

3 lines of code changed in 1 file:

sbu062 2017-07-09 09:42 Rev.: 4445

doc: small add

1 lines of code changed in 1 file:

sbu062 2017-07-09 09:42 Rev.: 4444

fix logging code

3 lines of code changed in 1 file:

sbu062 2017-07-09 09:42 Rev.: 4443

doc: (visibility) overload method(s) for various objects in class hierarchy are now ready, did doxy cleanup and additional error logging for base SPATIAL class object lacking object_area default

70 lines of code changed in 1 file:

sbu062 2017-07-08 23:39 Rev.: 4442

(visibility_basic) now (visibility), method placed into class hierarchy

4 lines of code changed in 1 file:

sbu062 2017-07-08 23:39 Rev.: 4441

(visibility) method for condition, object_area added

13 lines of code changed in 1 file:

sbu062 2017-07-08 23:39 Rev.: 4440

(visibility) method for spatial, object_area now optional

10 lines of code changed in 1 file:

sbu062 2017-07-08 23:39 Rev.: 4439

doc: small fix

2 lines of code changed in 1 file:

sbu062 2017-07-08 23:39 Rev.: 4438

(visibility) method for predator optional object area parameter added

14 lines of code changed in 1 file:

sbu062 2017-07-08 23:39 Rev.: 4437

(visibility) method for food item optional object area parameter added; debug code for dirwalk disabled

73 lines of code changed in 1 file:

sbu062 2017-07-08 23:38 Rev.: 4436

doc: fixed contrast parameter description for different objects

6 lines of code changed in 1 file:

sbu062 2017-07-08 23:38 Rev.: 4435

(visibility): continue cleanup spatial object class structure, visibility - added contrast to 'spatial object perception component'

14 lines of code changed in 1 file:

sbu062 2017-07-08 12:11 Rev.: 4434

added contrast parameter to make all (visibility) methods have the same parameter lists

37 lines of code changed in 1 file:

sbu062 2017-07-08 12:11 Rev.: 4433

doc: documented interface for (visibility) method for the agent

8 lines of code changed in 1 file:

sbu062 2017-07-08 09:21 Rev.: 4432

doc: added more docs on operators for spatial objects

37 lines of code changed in 1 file:

sbu062 2017-07-08 08:51 Rev.: 4431

(geo_poly3d_dist_point_to_section): public interface

6 lines of code changed in 1 file:

sbu062 2017-07-08 08:42 Rev.: 4430

doc: fix igage tag

9 lines of code changed in 1 file:

sbu062 2017-07-08 08:38 Rev.: 4429

doc: deleted latex formula, use image

0 lines of code changed in 1 file:

sbu062 2017-07-08 08:29 Rev.: 4428

doc: inline latex formula disabled

7 lines of code changed in 1 file:

sbu062 2017-07-08 08:29 Rev.: 4427

doc: latex matrix does not render well, did fixed svg/eps 800px

920 lines of code changed in 3 files:

sbu062 2017-07-08 08:28 Rev.: 4426

doc: small fix formula

3 lines of code changed in 1 file:

sbu062 2017-07-07 21:05 Rev.: 4425

doc: revised doxy doc and formulas for 3d (geo_poly3d_dist_point_to_section)

15 lines of code changed in 1 file:

sbu062 2017-07-07 20:52 Rev.: 4424

(geo_poly3d_dist_point_to_section): made 3d version of minimum distance from spatial object to a segment, still needs updating doxy doc and checking

26 lines of code changed in 1 file:

sbu062 2017-07-07 20:52 Rev.: 4423

(geo_poly3d_dist_point_to_section): skeleton for a 3D function

128 lines of code changed in 1 file:

sbu062 2017-07-07 15:33 Rev.: 4422

doc: subtitle

1 lines of code changed in 1 file:

sbu062 2017-07-07 15:26 Rev.: 4421

doc: cost of swimming is not used from do, it calculated automatically after movement

3 lines of code changed in 1 file:

sbu062 2017-07-07 15:21 Rev.: 4420

doc: small fix, back

2 lines of code changed in 1 file:

sbu062 2017-07-07 15:20 Rev.: 4419

doc: small fix

3 lines of code changed in 1 file:

sbu062 2017-07-07 15:14 Rev.: 4418

doc: additional note on travel cost

7 lines of code changed in 1 file:

sbu062 2017-07-07 14:52

doc: small fix

2 lines of code changed in 2 files:

sbu062 2017-07-07 14:50 Rev.: 4415

migration object: public interface (execute)

4 lines of code changed in 1 file:

sbu062 2017-07-07 14:47 Rev.: 4414

migration object: renamed to expected_cost_moving, it is only for expectancy, real cost calculated automatically in (execute)

4 lines of code changed in 1 file:

sbu062 2017-07-07 14:42 Rev.: 4413

doc: fix formula

3 lines of code changed in 1 file:

sbu062 2017-07-07 14:41 Rev.: 4412

doc: latex formula only

6 lines of code changed in 1 file:

sbu062 2017-07-07 14:41 Rev.: 4411

(migration_motivations_expect): subtract cost of movement to the novel habitat

4 lines of code changed in 1 file:

sbu062 2017-07-07 11:55 Rev.: 4410

(migrate_do_execute): fix wrong CV, must be xy baseline weighted by vertical weight

2 lines of code changed in 1 file:

sbu062 2017-07-07 11:48 Rev.: 4409

doc: added notes

4 lines of code changed in 1 file:

sbu062 2017-07-07 11:43 Rev.: 4408

(migrate_do_execute) is now ready: added final steps

34 lines of code changed in 1 file:

sbu062 2017-07-07 11:35 Rev.: 4407

striped obsolete notes

7 lines of code changed in 1 file:

sbu062 2017-07-07 10:29 Rev.: 4406

need readme for bitbucket

0 lines of code changed in 1 file:

sbu062 2017-07-07 10:15 Rev.: 4405

added binary_io, the only file here

129 lines of code changed in 1 file:

cje012 2017-07-07 09:52 Rev.: 4403

Changed the code for writing/reading to/from binary files to reflect the changes in binary_IO.

10 lines of code changed in 1 file:

cje012 2017-07-07 09:51 Rev.: 4402

Major clean up of the code. Fixed inconsistend code and comments, errors and renamed matrix to array in all comments and code, to make it easier to understand. Added folderpath as a parameter in the beginning of the module temporarily.

722 lines of code changed in 1 file:

sbu062 2017-07-07 08:46 Rev.: 4401

(migrate_do_execute) correlated gaussian walk is shorter than the maximum, within 95% conf. int., when distance to novel target environment exceeds limit

13 lines of code changed in 1 file:

cje012 2017-07-06 15:12 Rev.: 4400

Added new testplot with intake and maxintake for the fast group.

21 lines of code changed in 1 file:

cje012 2017-07-06 14:45

Added max intake (intake_max).

54 lines of code changed in 3 files:

sbu062 2017-07-06 14:06 Rev.: 4396

(migrate_do_execute): shorter tag fits line

3 lines of code changed in 1 file:

sbu062 2017-07-06 14:06 Rev.: 4395

(migrate_do_execute): do relocate into novel environment

7 lines of code changed in 1 file:

sbu062 2017-07-06 14:06 Rev.: 4394

(execute) automatically detect maximum and minimum depth for vertical migration do procedures: go_up_depth and go_down_depth

38 lines of code changed in 1 file:

sbu062 2017-07-06 14:06 Rev.: 4393

doc: updated

7 lines of code changed in 1 file:

sbu062 2017-07-06 14:06 Rev.: 4392

automatically detect maximum and minimum depth for vertical migration do procedures: go_up_depth and go_down_depth

38 lines of code changed in 1 file:

sbu062 2017-07-06 13:04

doc: small fix

13 lines of code changed in 2 files:

sbu062 2017-07-06 12:51 Rev.: 4389

doc: additional notes and docs + code example

22 lines of code changed in 1 file:

sbu062 2017-07-06 12:51 Rev.: 4388

(migrate_do_execute): now use Global_Habitats_Available array for environment limits in partial corwalk migration when distance is too long

6 lines of code changed in 1 file:

sbu062 2017-07-06 12:51 Rev.: 4387

(init_environment_objects): initialised Global_Habitats_Available

6 lines of code changed in 1 file:

sbu062 2017-07-06 12:51 Rev.: 4386

added global array of all available habitats Global_Habitats_Available

22 lines of code changed in 1 file:

sbu062 2017-07-06 12:51 Rev.: 4385

(migrate_do_execute): continue step 2

61 lines of code changed in 1 file:

sbu062 2017-07-06 11:08 Rev.: 4384

doc: revised TODOs

20 lines of code changed in 1 file:

sbu062 2017-07-06 11:08 Rev.: 4383

(migrate_do_this): save target point in target environment, target point now mwmber of the MIGRATE class

7 lines of code changed in 1 file:

sbu062 2017-07-06 11:08 Rev.: 4382

(migrate_do_execute): skeleton

40 lines of code changed in 1 file:

sbu062 2017-07-06 08:09 Rev.: 4381

(rwalk): (spatial_moving_randomwalk_gaussian_step_25d) now uses the .radd. operator as (corwalk) local (delta_shift) function deleted

19 lines of code changed in 1 file:

sbu062 2017-07-06 08:02 Rev.: 4380

(rwalk): (spatial_moving_randomwalk_gaussian_step_3d), (delta_shift) function deleted

1 lines of code changed in 1 file:

sbu062 2017-07-06 08:02 Rev.: 4379

(rwalk): (spatial_moving_randomwalk_gaussian_step_3d) now uses the .radd. operator as corwalk instead of local (delta_shift) function

14 lines of code changed in 1 file:

sbu062 2017-07-05 20:03 Rev.: 4378

doc: default 95% confidence interval for (corwalk)

2 lines of code changed in 1 file:

sbu062 2017-07-05 19:52 Rev.: 4377

doc: legend added

180 lines of code changed in 2 files:

sbu062 2017-07-05 19:50 Rev.: 4376

doc: (dirwalk) is declared obsolete

3 lines of code changed in 1 file:

sbu062 2017-07-05 19:50 Rev.: 4375

doc: minor addition

7 lines of code changed in 1 file:

sbu062 2017-07-05 19:42 Rev.: 4374

added example 3d walk plot for corwalk

1325 lines of code changed in 3 files:

sbu062 2017-07-05 19:32 Rev.: 4373

debug code: test walk away from self

4 lines of code changed in 1 file:

sbu062 2017-07-05 19:32 Rev.: 4372

debug code: use separate spatial object as target

24 lines of code changed in 1 file:

sbu062 2017-07-05 18:51 Rev.: 4371

(escape_dart_do_execute): use the (corwalk) procedure for random walk away of the predator

32 lines of code changed in 1 file:

sbu062 2017-07-05 17:43 Rev.: 4370

doc: delete tables that make pdflatex get stuck

24 lines of code changed in 1 file:

sbu062 2017-07-05 17:01 Rev.: 4369

doc: link to .radd. operator doesn't render

2 lines of code changed in 1 file:

sbu062 2017-07-05 17:01 Rev.: 4368

doc: try link to .radd. operator

2 lines of code changed in 1 file:

sbu062 2017-07-05 16:46 Rev.: 4367

doc: typo

2 lines of code changed in 1 file:

sbu062 2017-07-05 16:39 Rev.: 4366

doc: small changes

18 lines of code changed in 1 file:

sbu062 2017-07-05 16:31 Rev.: 4365

doc: small note added

6 lines of code changed in 1 file:

sbu062 2017-07-05 16:31 Rev.: 4364

debug code for older (dirwalk); coxy fix

26 lines of code changed in 1 file:

sbu062 2017-07-05 15:47 Rev.: 4363

detelet obsolete unused branch, had to manually flat-copy main revs from hg

0 lines of code changed in 1 file:

sbu062 2017-07-05 15:33 Rev.: 4362

doc: added doxy links to (corwalk) public interface

4 lines of code changed in 1 file:

sbu062 2017-07-05 15:14 Rev.: 4361

dirwalk_converge 2270: merged hg branch back to main; debug code only

4 lines of code changed in 2 files:

sbu062 2017-07-05 15:12 Rev.: 4360

dirwalk_converge 2267: (corwalk): debug code only

277 lines of code changed in 1 file:

sbu062 2017-07-05 15:10 Rev.: 4359

dirwalk_converge 2262: returned (dirwalk) procedures to the original, pre 'dirwalk_converge' state, fixing doxy doc only

84 lines of code changed in 1 file:

sbu062 2017-07-05 15:09 Rev.: 4358

dirwalk_converge 2260: doc: small fix, plus debug code

181 lines of code changed in 2 files:

sbu062 2017-07-05 15:08 Rev.: 4357

dirwalk_converge 2254: implemented random operator '.radd.'

111 lines of code changed in 1 file:

sbu062 2017-07-05 15:06 Rev.: 4356

dirwalk_converge 2251: (spatial_moving_dirwalk_gaussian_step_3d_uni) experimental (dirwalk) with whole random step

305 lines of code changed in 1 file:

sbu062 2017-07-05 15:05 Rev.: 4355

dirwalk_converge 2248: added convergence indcator to (dirwalk), so far 3D

26 lines of code changed in 1 file:

sbu062 2017-07-05 15:00 Rev.: 4354

development branch for dirwalk and corwalk
--line, and those below, will be ignored--

A https://subversion.uib.no/repos/aha-fortran/branches/budaev/HEDG2_01_dirwalk

0 lines of code changed in 1 file:

cje012 2017-07-05 12:53 Rev.: 4353

Added the use of fixed_seed (from functions.f90) so that the individuals always start in the same environment (given that the same parameterfile is used). Thank you so much Sergey!

4 lines of code changed in 1 file:

cje012 2017-07-05 12:47 Rev.: 4352

Added subroutine for restarting the random_number pseudorandom sequence, using a number set by user.

17 lines of code changed in 1 file:

cje012 2017-07-05 11:33 Rev.: 4351

Changed calculations when writing to the ind array from *52 to *(365._RP / t_duration) to accomodate for different time durations, also sorted the lines for writing so it is more logical (note that I keep the same positions in the array, so that the plotting.r script still works). .

11 lines of code changed in 1 file:

cje012 2017-07-05 10:49 Rev.: 4350

Minor change.

4 lines of code changed in 1 file:

sbu062 2017-07-05 10:31 Rev.: 4349

fixed precision constant, PR to RP as defined

105 lines of code changed in 3 files:

cje012 2017-07-05 10:16

Added _RP to all reals.

139 lines of code changed in 3 files:

cje012 2017-07-05 09:05

Cleaned up in code.

32 lines of code changed in 2 files:

cje012 2017-07-05 08:59 Rev.: 4343

Added double precision as default for gfortran as well.

5 lines of code changed in 2 files:

cje012 2017-07-05 08:58

Changed PREC_REAL into RP to make the code easier to read.

110 lines of code changed in 4 files:

cje012 2017-07-05 08:43 Rev.: 4338

Changed maxCounter into an integar as it was declared incorrecly as a real number.

12 lines of code changed in 1 file:

cje012 2017-07-05 08:36 Rev.: 4337

Removed import of ifport (use ifport) and removed Box-Muller tranformation for generating random numbers from a standard distribution, as they are no longer in use, compiler spesific and outdated.

2 lines of code changed in 1 file:

sbu062 2017-07-04 14:57 Rev.: 4336

doc: typo

2 lines of code changed in 1 file:

sbu062 2017-07-04 10:52 Rev.: 4335

doc: (dirwalk) documented parameters for (updated_position) sub-procedure

8 lines of code changed in 1 file:

sbu062 2017-07-04 10:51 Rev.: 4334

(dirwalk) set parameter intent in (updated_position) sub-procedure

15 lines of code changed in 1 file:

sbu062 2017-07-04 10:51 Rev.: 4333

(dirvalk) AWAY is a clearer tag

6 lines of code changed in 1 file:

sbu062 2017-07-04 10:22 Rev.: 4332

doc: more description for (dirwalk) parameters, 2.5d version

24 lines of code changed in 1 file:

sbu062 2017-07-04 10:22 Rev.: 4331

doc: more description for (dirwalk) parameters

25 lines of code changed in 1 file:

sbu062 2017-07-04 10:22 Rev.: 4330

(dirvalk): is_away is a better name

16 lines of code changed in 1 file:

sbu062 2017-07-04 10:22 Rev.: 4329

done reverse (dirvalk) for 2.5D generic

33 lines of code changed in 1 file:

sbu062 2017-07-04 10:22 Rev.: 4328

implementing reverse (dirvalk) for 2.5D generic

17 lines of code changed in 1 file:

sbu062 2017-07-04 10:22 Rev.: 4327

implemented reverse (dirvalk) so far for full 3D generic, parameter is_avoid now makes the object maximise the distance to the target

48 lines of code changed in 1 file:

sbu062 2017-07-04 06:59 Rev.: 4326

doc: small change in (dirwalk)

4 lines of code changed in 1 file:

sbu062 2017-07-04 06:56 Rev.: 4325

in (dirwalk), target must be class, fix intent

5 lines of code changed in 1 file:

sbu062 2017-07-04 06:07 Rev.: 4324

doc: small changes

1 lines of code changed in 1 file:

sbu062 2017-07-04 05:59 Rev.: 4323

(migrate_motivations_expect) now ready, needs checking still

336 lines of code changed in 1 file:

sbu062 2017-07-03 14:15 Rev.: 4322

continue (migrate_motivations_expect)

23 lines of code changed in 1 file:

sbu062 2017-07-03 14:15 Rev.: 4321

deleted obsolete vars in (migrate_do_this)

0 lines of code changed in 1 file:

sbu062 2017-07-03 14:15 Rev.: 4320

skeleton for (migrate_motivations_expect)

125 lines of code changed in 1 file:

sbu062 2017-07-03 13:12 Rev.: 4319

doc: typo

1 lines of code changed in 1 file:

sbu062 2017-07-03 12:56 Rev.: 4318

doc: hope function parameters explained

3 lines of code changed in 1 file:

sbu062 2017-07-03 12:54 Rev.: 4317

doc: more info on optional parameters

15 lines of code changed in 1 file:

cje012 2017-07-03 12:54 Rev.: 4316

Put the limit for when the survival approaches 0 with a new adjustable value called starvation_limit.

36 lines of code changed in 1 file:

sbu062 2017-07-03 12:45 Rev.: 4315

(migrate_do_this): conspecifics expectation uses arbitrary memory window, last doc formatting, (do_this) for migrate is ready now

25 lines of code changed in 1 file:

sbu062 2017-07-03 12:45 Rev.: 4314

added conspecifics memory window parameter in (migrate_do_this)

36 lines of code changed in 1 file:

sbu062 2017-07-03 12:45 Rev.: 4313

implemented memory average method for conspecifics: (get_consp_mean_n)

50 lines of code changed in 1 file:

sbu062 2017-07-03 12:45 Rev.: 4312

doc: continue (migrate_do_this)

10 lines of code changed in 1 file:

sbu062 2017-07-03 12:45 Rev.: 4311

doc: typo

1 lines of code changed in 1 file:

cje012 2017-07-03 12:37 Rev.: 4310

Put the limit for when the survival approaches 0 with a new adjustable value called starvation_limit.

8 lines of code changed in 1 file:

sbu062 2017-07-03 11:14 Rev.: 4309

doc: typo

1 lines of code changed in 1 file:

sbu062 2017-07-03 11:11 Rev.: 4308

doc: coding style

16 lines of code changed in 1 file:

sbu062 2017-07-03 10:59 Rev.: 4307

doc: added commit msg style

21 lines of code changed in 1 file:

sbu062 2017-07-03 10:47 Rev.: 4306

doc:still notes render poorly, try top put to return

11 lines of code changed in 1 file:

sbu062 2017-07-03 10:43 Rev.: 4305

doc: spaces between notes are not tolerated

6 lines of code changed in 1 file:

sbu062 2017-07-03 10:38 Rev.: 4304

doc: small change

2 lines of code changed in 1 file:

sbu062 2017-07-03 10:27 Rev.: 4303

duplicate arning is obsolete now

1 lines of code changed in 1 file:

cje012 2017-07-03 08:23

Changed R_categories_init and length_init from integer to real.

8 lines of code changed in 2 files:

sbu062 2017-07-03 07:22 Rev.: 4300

forgot tags

3 lines of code changed in 1 file:

sbu062 2017-07-03 07:16 Rev.: 4299

reorder notex on params

12 lines of code changed in 1 file:

sbu062 2017-07-03 07:05 Rev.: 4298

small fix doxy

2 lines of code changed in 1 file:

sbu062 2017-07-03 06:52 Rev.: 4297

single check condition, check if arrays non-provided give error code

5 lines of code changed in 1 file:

sbu062 2017-07-03 06:47 Rev.: 4296

check for possible division by zero in (hope)

21 lines of code changed in 1 file:

sbu062 2017-07-02 23:09 Rev.: 4295

warning added, no vector length checks are made

4 lines of code changed in 1 file:

sbu062 2017-07-02 23:03 Rev.: 4294

code format only

2 lines of code changed in 1 file:

sbu062 2017-07-02 23:00 Rev.: 4293

hope function is pure

2 lines of code changed in 1 file:

sbu062 2017-07-02 22:56 Rev.: 4292

hope function (hope) now accepts arbitrary raw grid arrays, useful for complex nonstandard/non-monotonic grids with more than 3 elements

51 lines of code changed in 1 file:

sbu062 2017-07-02 22:56 Rev.: 4291

plot command for 4 elelemt hope grid

4 lines of code changed in 1 file:

sbu062 2017-07-02 20:57 Rev.: 4290

continue (migrate_do_this)

74 lines of code changed in 1 file:

sbu062 2017-07-02 19:37 Rev.: 4289

typo

1 lines of code changed in 1 file:

sbu062 2017-07-02 19:06 Rev.: 4288

pre-rendered latex formulas have bounding box tiny points 800x64 px

2261 lines of code changed in 7 files:

sbu062 2017-07-02 16:21 Rev.: 4287

delete spaces

1 lines of code changed in 1 file:

sbu062 2017-07-02 16:05 Rev.: 4286

reduce space

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sbu062 2017-07-02 15:50 Rev.: 4285

smaller flrmula in latex

1 lines of code changed in 1 file:

sbu062 2017-07-02 15:46 Rev.: 4284

another formula pre-rendeded

582 lines of code changed in 3 files:

sbu062 2017-07-02 15:37 Rev.: 4283

smaller latex formula

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sbu062 2017-07-02 15:33 Rev.: 4282

rendered formula instead of latex code

1239 lines of code changed in 3 files:

sbu062 2017-07-02 15:06 Rev.: 4281

added interactive command

4 lines of code changed in 1 file:

sbu062 2017-07-02 14:46

typo fixed

4 lines of code changed in 2 files:

sbu062 2017-07-02 14:42 Rev.: 4278

slightly smaller formula

2 lines of code changed in 1 file:

sbu062 2017-07-02 14:39 Rev.: 4277

forgot mark end of list

1 lines of code changed in 1 file:

sbu062 2017-07-02 14:35 Rev.: 4276

still poor in latex, try @n

1 lines of code changed in 1 file:

sbu062 2017-07-02 14:33 Rev.: 4275

default renders poorly

2 lines of code changed in 1 file:

sbu062 2017-07-02 14:29 Rev.: 4274

try defaults for latex

1 lines of code changed in 1 file:

sbu062 2017-07-02 14:15 Rev.: 4273

small inline formula plot doesn't render correctly in Latex/pdf

2 lines of code changed in 1 file:

sbu062 2017-07-02 14:10 Rev.: 4272

try to make formula in graphics

687 lines of code changed in 3 files:

sbu062 2017-07-02 13:52 Rev.: 4271

subtitle obsolete

1 lines of code changed in 1 file:

sbu062 2017-07-02 13:47 Rev.: 4270

single line vectors render better

2 lines of code changed in 1 file:

sbu062 2017-07-02 13:40 Rev.: 4269

interface for migrate documented now

10 lines of code changed in 1 file:

sbu062 2017-07-02 13:34 Rev.: 4268

image plot returned

3 lines of code changed in 1 file:

sbu062 2017-07-02 13:27 Rev.: 4267

fix (migrate_do_this) doxy comments to use the hope function

14 lines of code changed in 1 file:

sbu062 2017-07-02 13:09 Rev.: 4266

now use the hope function in (migrate_do_this)

5 lines of code changed in 1 file:

sbu062 2017-07-02 13:01 Rev.: 4265

added maximum hope and zero hope ratio

308 lines of code changed in 3 files:

sbu062 2017-07-02 12:51 Rev.: 4264

more correct vector parameter name is 'ratio'

5 lines of code changed in 1 file:

sbu062 2017-07-02 12:44 Rev.: 4263

further small fixes doxy

5 lines of code changed in 1 file:

sbu062 2017-07-02 12:41 Rev.: 4262

both doxy latex formulas are in row vector, vertical matrices seem unsupported in doxy

2 lines of code changed in 1 file:

sbu062 2017-07-02 12:35 Rev.: 4261

simplify formula for vector, doxygen does not seem to support latex notation for matrices

1 lines of code changed in 1 file:

sbu062 2017-07-02 12:28 Rev.: 4260

fix doxy formula

3 lines of code changed in 1 file:

sbu062 2017-07-02 12:20 Rev.: 4259

small fix doxy for (hope)

7 lines of code changed in 1 file:

sbu062 2017-07-02 12:12 Rev.: 4258

the function (hope) fully implemented and documented

78 lines of code changed in 1 file:

sbu062 2017-07-02 09:28 Rev.: 4257

the general hope function (hope) implemented, needs doxy docs yet

30 lines of code changed in 1 file:

sbu062 2017-07-02 09:28 Rev.: 4256

initial skeleton for separate hope function

18 lines of code changed in 1 file:

sbu062 2017-07-02 08:36 Rev.: 4255

in WALK_RANDOM (walk_random_motivations_expect): use this%distance directly, doxy cleanup

13 lines of code changed in 1 file:

sbu062 2017-07-02 08:36 Rev.: 4254

in WALK_RANDOM: cost_moving renamed to expected_cost_moving; stochastic distance in (do_this); expected food itrem distance in case of no perception now weighted by WALK_RANDOM_DIST_EXPECT_FOOD_UNCERTAIN_FACT

76 lines of code changed in 1 file:

sbu062 2017-07-02 06:04 Rev.: 4253

small doxy change, parameters described, in (cost_swim)

3 lines of code changed in 1 file:

sbu062 2017-07-02 05:58 Rev.: 4252

renamed cost_exponent to exponent in (cost_swim) function

9 lines of code changed in 1 file:

sbu062 2017-07-02 05:49 Rev.: 4251

actual swimming distance in cost calculation in (walk_random_do_execute)

7 lines of code changed in 1 file:

sbu062 2017-07-02 05:49 Rev.: 4250

invoke autodetected distance for swim cost in (escape_dart_do_execute)

1 lines of code changed in 1 file:

sbu062 2017-07-02 05:49 Rev.: 4249

autodetected distance using (way) in (condition_cost_swimming_burst)

14 lines of code changed in 1 file:

sbu062 2017-07-02 05:18 Rev.: 4248

actual cost of walk in (escape_dart_do_execute), based on the (way) function

20 lines of code changed in 1 file:

sbu062 2017-07-01 20:35 Rev.: 4247

add doxy doc for walk code

10 lines of code changed in 1 file:

sbu062 2017-07-01 20:35 Rev.: 4246

walk code for no predator present case

8 lines of code changed in 1 file:

sbu062 2017-07-01 20:19 Rev.: 4245

forgot actual displacement

16 lines of code changed in 1 file:

sbu062 2017-07-01 09:19 Rev.: 4244

forgot rev number

1 lines of code changed in 1 file:

sbu062 2017-07-01 09:18 Rev.: 4243

+tag doesn't work in list, use parentheses

3 lines of code changed in 1 file:

sbu062 2017-07-01 09:16 Rev.: 4242

another small fix

1 lines of code changed in 1 file:

sbu062 2017-07-01 09:15 Rev.: 4241

small fix

2 lines of code changed in 1 file:

sbu062 2017-07-01 09:05 Rev.: 4240

refer to grwin in note

3 lines of code changed in 1 file:

June 2017 »

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