changelog update
16 lines of code changed in 1 file:
minor fix dedug code only, using logical flag accessor for food now
1 lines of code changed in 1 file:
logical flag accessors for spatial perceptions: (has_food), (has_consp), (has_pred)
55 lines of code changed in 1 file:
all deallocate now safe, first check if allocated
9 lines of code changed in 1 file:
debug code changes
22 lines of code changed in 1 file:
all allocate now check if previously allocated (if .not. allocated(...)), deleted body from (behaviour_do_eat_food_item), + debug code for random walk and food perception
50 lines of code changed in 1 file:
merged branch
50 lines of code changed in 1 file:
added forgotten interpolation routines to doc
50 lines of code changed in 1 file:
returned whole array code without explicit loops, works alright on ifort v.17 (was broken in v.13)
12 lines of code changed in 1 file:
updated changelog
7 lines of code changed in 1 file:
capture success flag in (do_this), final implementation of (execute) in (EAT_FOOD)
60 lines of code changed in 1 file:
deleted obsolete functions from the condition: (stomach_limit) and (food_absorb)
0 lines of code changed in 1 file:
merged latest changes in doc
18 lines of code changed in 2 files:
added tip on pure/elemental
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merged latest changes in Makefile
47 lines of code changed in 3 files:
added compiler target shortcuts (intel, gnu, sun)
10 lines of code changed in 1 file:
changelog update
32 lines of code changed in 1 file:
added cross-ref to intel static library build
12 lines of code changed in 2 files:
alive functions now elemental
4 lines of code changed in 1 file:
changelog update
20 lines of code changed in 1 file:
minor fix old comments
2 lines of code changed in 1 file:
moved alive functions from the_individual_agent, top in hierarchy, to the_individual_genome, base at the hierarchy classes
51 lines of code changed in 1 file:
prototype (execute) method for
41 lines of code changed in 1 file:
convert genome procedures to elemental
18 lines of code changed in 1 file:
minor fix comments
7 lines of code changed in 1 file:
minor fix comment placement
1 lines of code changed in 1 file:
fix initialisation in (is_max_final_obj)
2 lines of code changed in 1 file:
minor, rename (gos_expect) to (gos_expected)
1 lines of code changed in 1 file:
changelog update
3 lines of code changed in 1 file:
parse svn version number, (parse_svn_version) in (logger_init)
27 lines of code changed in 1 file:
merged figs
375 lines of code changed in 4 files:
fix charts
91 lines of code changed in 2 files:
updated charts
304 lines of code changed in 4 files:
merged from branch
3304 lines of code changed in 7 files:
changelog update
3 lines of code changed in 1 file:
changelog update
9 lines of code changed in 2 files:
moved (gos_expect) to the base root behaviour class
24 lines of code changed in 1 file:
fixed (gos_expect) for eat_food class
17 lines of code changed in 1 file:
converted appraisal and gos procedures to elemental, plus a few renames and comments
13 lines of code changed in 1 file:
changelog update
4 lines of code changed in 1 file:
parameter to disable modulation in appraisal altogether
11 lines of code changed in 1 file:
renamed procedures to reflect class hierarchy moves
8 lines of code changed in 1 file:
changelog update
21 lines of code changed in 1 file:
Implemented (max_perception) for MOTIVATION class, use in gos and eat_food
22 lines of code changed in 1 file:
implemented (motivations_primary_calc) in appraisal, no genetic modulation parameter in (modulation)
70 lines of code changed in 1 file:
converted to use of motivation-bound functions in (max_motivation = maxval([ &
thishunger%max_perception(), &
thisavoid_passive%max_perception(), &
thisavoid_active%max_perception(), &
thisreproduction%max_perception (gos_expect) procedure of (ear_food)
20 lines of code changed in 1 file:
use associate construct to alias in (gos_find_global_state)
39 lines of code changed in 1 file:
minor comment fix
2 lines of code changed in 1 file:
OF and TL started to build loops for energy allocation to egg production
42 lines of code changed in 1 file:
another small fix
3 lines of code changed in 1 file:
minor fix block
1 lines of code changed in 1 file:
added block constructs in modulation code
62 lines of code changed in 1 file:
changelog update
22 lines of code changed in 1 file:
use (is_max_final) function in gos determination, + (gos_ind_reset) in motivations collection object
25 lines of code changed in 1 file:
object form of (is_max_final), start use in gos, incomplete
24 lines of code changed in 1 file:
motivation class bound funcs for max final perception components
48 lines of code changed in 1 file:
maximum final motivations func, used in gos
20 lines of code changed in 1 file:
fix schemes after adding (MOTIVATION) intermediate class
2540 lines of code changed in 2 files:
fix motivations init, now call lower-level class proc
3 lines of code changed in 1 file:
moving functions from (APPRAISAL) class to (MOTIVATION), all transfornmed, but need checking and further moves
73 lines of code changed in 1 file:
started moving functions from (APPRAISAL) class to (MOTIVATION), motivation_primary_sum, modulation_none that do not involve changing (this) agent
120 lines of code changed in 1 file:
(EXPECTANCY) class deprecated and deleted, now moved to make unitary (MOTIVATION) class
32 lines of code changed in 1 file:
small reformat
9 lines of code changed in 1 file:
changelog update
3 lines of code changed in 1 file:
implemented global maximum parameter for rescale in (motivations_expect) for eat food item
17 lines of code changed in 1 file:
changelog update + micro change
8 lines of code changed in 2 files:
deprecate and deleted (expectancy_motivation_expectations_recalculate) in expectancy class, all this is now in specific behaviours, so we can plug fake perception overrides
0 lines of code changed in 1 file:
first full implementation of eat food item expectancy procedure (motivations_expect)
284 lines of code changed in 1 file:
add behaviour chart, fix appreaisal and behaviour charts
14 lines of code changed in 5 files:
modified pics
769 lines of code changed in 4 files:
changelog updated
8 lines of code changed in 1 file:
fixed comments for (motivation_components)
4 lines of code changed in 1 file:
completed optional perception overrides in (motivation_components), complete build ok
145 lines of code changed in 1 file:
fix strings module name
1 lines of code changed in 1 file:
fixed strings module name
1 lines of code changed in 1 file:
changelog up
12 lines of code changed in 1 file:
fixed types for perception overrides in (motivation_components)
8 lines of code changed in 1 file:
prototype perception override dommy parameters in (motivation_components), so far all real : wrong types, must agree with perception objects
30 lines of code changed in 1 file:
deleted inner subroutines in (motivation_components), will next add arbitrary perception opverriding
57 lines of code changed in 1 file:
delete (motivation_components) in root motivation (STATE_MOTIVATION_BASE)
3 lines of code changed in 1 file:
merge latest
0 lines of code changed in 2 files:
cleanup unused local names
0 lines of code changed in 2 files:
merge from budaev
35 lines of code changed in 3 files:
changelog update
7 lines of code changed in 1 file:
short description of limitations in the strings module + disclaimer (parameters forbidden)
32 lines of code changed in 2 files:
fix strings module name for Makefile
2 lines of code changed in 1 file:
sert labels for if-blocks in (motivation_components)
21 lines of code changed in 1 file:
update changelog
13 lines of code changed in 1 file:
individual multiple appraisal subs obsolete deleted finally from the (APPRAISAL) class
3 lines of code changed in 1 file:
plugged new perception components PERCEPT_COMPONENTS_MOTIV to APPRAISAL. individual multiple appraisal subs obsolete now -- marked for deletion (not deleted yet)
199 lines of code changed in 1 file:
plugged the new perception components of motivation neuro-resp procedure into expectancy (motivations_expect), inner subs deprecated and deleted. complete now
86 lines of code changed in 1 file:
plugged the new perception components of motivation neuro-resp procedure into expectancy (motivations_expect), inner subs deprecated. so far for hunger only.
27 lines of code changed in 1 file:
changelog update
3 lines of code changed in 1 file:
comments reformat on (perception_components_neuronal_response_) procs
12 lines of code changed in 1 file:
changelog update
41 lines of code changed in 1 file:
reformatted (motivation_components_init) - (perception_components_neuronal_response_init_set) ready
82 lines of code changed in 1 file:
implemented age component in (motivation_components_init)
20 lines of code changed in 1 file:
implemented energy component in (motivation_components_init)
21 lines of code changed in 1 file:
implemented bodymass component in (motivation_components_init)
23 lines of code changed in 1 file:
implemented stom component in (motivation_components_init)
23 lines of code changed in 1 file:
implemented predator component in (motivation_components_init)
21 lines of code changed in 1 file:
implemented conspec component in (motivation_components_init)
23 lines of code changed in 1 file:
implemented food_mem component in (motivation_components_init)
20 lines of code changed in 1 file:
implemented food_dir component in (motivation_components_init)
24 lines of code changed in 1 file:
neuronal function with inout intent external interface (motivation_components_init), the function itself is not fully implemented yet, only light and depth done, same function in class (eat_food_item) commented deprecated
8 lines of code changed in 1 file:
inout intent copy of (motivation_components), reimplemented full processing for depth
24 lines of code changed in 1 file:
inout intent copy of (motivation_components), reimplemented full processing for light
20 lines of code changed in 1 file:
intent inout copy of (motivation_components) in (percept_component_motiv) class, this will set neuronal responses and gene labels
404 lines of code changed in 1 file:
minor comments
2 lines of code changed in 1 file:
comments only, very small
2 lines of code changed in 1 file:
plugged (motivation_components) into percept_component_motiv class up the hierarchy level, still retain in state_motivation_base; small changes
327 lines of code changed in 1 file:
changelog only
5 lines of code changed in 1 file:
refactored (motivation_components) for root motivational state, now neuronal response function called only if G x P boolean matrix is explicitly present, placed local subroutine calls inside present check if block, block constructs obsolete
74 lines of code changed in 2 files:
individual perception components for root base motivation class (motivation_components) fixed, all commondata parameters passed correctly, still quite ugly code with huge parameter list
258 lines of code changed in 1 file:
individual perceptual components for root base motivation state class(state_motivation_expectations_calculate)
135 lines of code changed in 2 files:
moved (motivations_expect) up to expectancy class, more natural modularising
49 lines of code changed in 1 file:
rename behaviour_base_motivation_expectations_recalculate
3 lines of code changed in 1 file:
moved huge appraisal-like motivations expectation code to (motivations_expect) in behaviour_base root class
266 lines of code changed in 2 files:
merged
34 lines of code changed in 2 files:
update changelog
2 lines of code changed in 1 file:
update fix doc, Change Log and svn log
32 lines of code changed in 1 file:
merge
1306 lines of code changed in 2 files:
update changelog
2 lines of code changed in 1 file:
added some on svn log to manual
15 lines of code changed in 1 file:
changelog svn2cl --group-by-day
20 lines of code changed in 2 files:
changelog svn2cl --group-by-day
272 lines of code changed in 2 files:
added changelog produced by svn2cl
3185 lines of code changed in 2 files:
GOS motivation expectancy for reproductive motivation
124 lines of code changed in 1 file:
GOS motivation expectancy for active avoidance
117 lines of code changed in 1 file:
GOS motivation expectancy for passive avoidance
114 lines of code changed in 1 file:
fix / reorder comments only
29 lines of code changed in 1 file:
predation_risk perception function, fixed appraisal, plus GOS motivation expectancy for hunger ready
180 lines of code changed in 1 file:
minor fix comments
6 lines of code changed in 1 file:
reformat only
35 lines of code changed in 1 file:
add debug log to food item capture
6 lines of code changed in 1 file:
use capture_success in eat_food_item
16 lines of code changed in 1 file:
food_item stochastic capture success function
40 lines of code changed in 1 file:
deleted old todo's
0 lines of code changed in 1 file:
minor change, delete default init label
1 lines of code changed in 1 file:
minor change formatting
4 lines of code changed in 1 file:
update notes and comments on apparisal
16 lines of code changed in 1 file:
minor comments
5 lines of code changed in 1 file:
minor reformat comment
1 lines of code changed in 1 file:
minor reformat
2 lines of code changed in 1 file:
minor comment only
3 lines of code changed in 1 file:
removed separate attention class, use universal PERCEPT_COMPONENTS_MOTIV
50 lines of code changed in 1 file:
refactored and modularised, perception components plugged into root class motivational state
217 lines of code changed in 1 file:
attention now uses perception components (%percept_component%)
49 lines of code changed in 1 file:
minor add todo
1 lines of code changed in 1 file:
primary motivation based on average rather than sum of perceptual components
2 lines of code changed in 1 file:
minor comment
2 lines of code changed in 1 file:
mean food mass func in food perception object
18 lines of code changed in 1 file:
small comments
4 lines of code changed in 1 file:
size-to-mass backend non-OO for food item
25 lines of code changed in 1 file:
minor fix
13 lines of code changed in 1 file:
added average food size in perception memory, food perception object, funcs for average item size and average dist to items
100 lines of code changed in 1 file:
added optional maximum value parameter to primary motivation procedure (sim components), should now take maximum value from memory of population mean or hard-wired from global means
23 lines of code changed in 1 file:
summing up for primary motivation now uses attention weights
32 lines of code changed in 1 file:
motivation state component init procedures now use attention weights
44 lines of code changed in 1 file:
fix attention weight init function + parameters
172 lines of code changed in 1 file:
attention weights class and init procedure
89 lines of code changed in 1 file:
minor comment fix only
2 lines of code changed in 1 file:
maximum perception value function for generic root motivation state component, `motivation_primary_sum` now uses this maximum value function and (previous commit) primary motivation value
33 lines of code changed in 1 file:
comments only
6 lines of code changed in 1 file:
primary motivation component sum now uses primary motivation calc function defined for the generic root motivation class
14 lines of code changed in 1 file:
calculate primary motivation value for a single generic component, gos expectation prototype added food_item, added approach_spatial
85 lines of code changed in 1 file:
private label
1 lines of code changed in 1 file:
fix all behaviour components labels and comments, unitary init expectancy components
63 lines of code changed in 1 file:
approach conspecific behaviour extends now approach spatial object generic class
4 lines of code changed in 1 file:
prototype approach behaviour with init proc
31 lines of code changed in 1 file:
deferred init function for behaviour base root class plus init procedures for components
245 lines of code changed in 1 file:
init procedure for eat food item behavioural component
16 lines of code changed in 1 file:
do and do-execute procedures for eat food item behaviour
40 lines of code changed in 1 file:
food processing functions now elemental
8 lines of code changed in 1 file:
food processing functions object form ready now
82 lines of code changed in 1 file:
generic interface added only
5 lines of code changed in 1 file:
food processing cost function body_mass_processing_cost_calc, added food object based version, non-food-object version now has optional food_gain, plus debug code to test ifort bugs
71 lines of code changed in 1 file:
food gain functions for the condition / body
68 lines of code changed in 1 file:
Øyvind, Tom and Christian made first version of model structure together.
72 lines of code changed in 1 file:
18 lines of code changed in 1 file:
prototype internal representation of food processing
112 lines of code changed in 1 file:
merged from my branch
2281 lines of code changed in 8 files:
Debugged together. Corrected some mistakes in SMR standardization. Something is still wrong with either SMR or AMR - values are too different.
10 lines of code changed in 1 file:
expectancy prototype accept agent class object (the_agent)
7 lines of code changed in 1 file:
added and trait_set_genotype_gamma2gene for self intent in, in addition to trait_init_genotype_gamma2gene with intent inout (sets label, label not optional now to avoid interface ambiguity) , added common generic interface neuro_resp + prototype expectancy procedure
114 lines of code changed in 1 file:
minor rename
6 lines of code changed in 1 file:
minor comment
1 lines of code changed in 1 file:
many changes, initial implementation of eat_food (behaviour do-procedure) plus reorganised and refactored food processing procedures in the condition
210 lines of code changed in 1 file:
expectancy small fix + eat food item prototype subroutine
47 lines of code changed in 1 file:
small reorganise
12 lines of code changed in 1 file:
comments only
22 lines of code changed in 1 file:
deleted obsolete types from THE_INDIVIDUAL
6 lines of code changed in 1 file:
comments only -- main principle / heuristic for decision making
8 lines of code changed in 1 file:
prototype motivational/affective expectancy and behavioural repertoire
84 lines of code changed in 1 file: