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The AHA Model
Revision: 12809
Reference implementation 04 (HEDG02_04)
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The AHA Model
Revision: 12809
Reference implementation 04 (HEDG02_04)
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The Hormone architecture of the AHA Model. More...
Go to the source code of this file.
Data Types | |
| type | the_hormones::hormones |
| This type adds hormonal architecture extending the genome object. More... | |
Modules | |
| module | the_hormones |
| Definition the hormonal architecture of the agent. | |
Functions/Subroutines | |
| subroutine | the_hormones::hormones_init_genotype (this) |
Initialise hormone levels based on the genome value. Two alleles are selected at random and input into the gamma2gene function to get the initial hormone values rescaled to 0:1. Note that the gamma2gene alleles defining the shape of the gamma function and the half-max effect are selected randomly in this version. Also, polyploid organisms are possible, in such case, two parameters are also randomly defined from a larger set (e.g. from four chromosomes in case of tetraploids). See implementation details and comments for each of the hormones. More... | |
| elemental subroutine | the_hormones::hormones_clean_history_stack (this) |
Clean the history stack of hormones: testosterone and estrogen histories are set to MISSING. More... | |
| elemental subroutine | the_hormones::hormones_update_history (this) |
| Update the sex steroid hormones history stack from the current level. More... | |
| elemental real(srp) function | the_hormones::hormones_reproductive_factor_calc (this) |
| Calculate the reproductive factor. Reproductive factor is defined as the current level of the_hormones::testosterone_level in males and the_hormones::estrogen_level in females. More... | |
| elemental real(srp) function | the_hormones::testosteron_baseline_get_level (this) |
| Get the value of testosterone baseline. More... | |
| elemental real(srp) function | the_hormones::estrogen_baseline_get_level (this) |
| Get the value of estrogen baseline. More... | |
Accessor functions for all the hormones. | |
Get and set functions for each hormone follow. We left them as individual hormone-specific functions duplicating code. Not ideal, but easy to use provided hormones do not change too often. Tiny atomic hormone get/set functions are easy to code. | |
| elemental real(srp) function | the_hormones::growhorm_get_level (this) |
| Get the value of growth hormone. More... | |
| elemental subroutine | the_hormones::growhorm_set_level (this, value_set) |
| Set the value of growth hormone. More... | |
| elemental real(srp) function | the_hormones::thyroid_get_level (this) |
| Get the value of thyroid. More... | |
| elemental subroutine | the_hormones::thyroid_set_level (this, value_set) |
| Set the value of thyroid. More... | |
| elemental real(srp) function | the_hormones::adrenaline_get_level (this) |
| Get the value of adrenaline. More... | |
| elemental subroutine | the_hormones::adrenaline_set_level (this, value_set) |
| Set the value of adrenaline. More... | |
| elemental real(srp) function | the_hormones::cortisol_get_level (this) |
| Get the value of cortisol. More... | |
| elemental subroutine | the_hormones::cortisol_set_level (this, value_set) |
| Set the value of cortisol. More... | |
| elemental real(srp) function | the_hormones::testosterone_get_level (this) |
| Get the value of testosterone. More... | |
| elemental subroutine | the_hormones::testosterone_set_level (this, value_set, update_history) |
| Set the value of testosterone. More... | |
| elemental real(srp) function | the_hormones::estrogen_get_level (this) |
| Get the value of estrogen. More... | |
| elemental subroutine | the_hormones::estrogen_set_level (this, value_set, update_history) |
| Set the value of estrogen. More... | |
Variables | |
| character(len= *), parameter, private | the_hormones::modname = "(THE_HORMONES)" |
1.9.1