Directory hormones_v2/stochastic_trunk/Tools/

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cje012 2020-03-26 11:20 Rev.: 9511

Deleted folder that was no longer needed

19 lines of code changed in 1 file:

• hormones_v2/stochastic_trunk/Tools: camilla_paper1_plots.r (+19 -18)

cje012 2020-02-12 07:32 Rev.: 9449

Changed instantaneous into short term on all axes

13 lines of code changed in 1 file:

• hormones_v2/stochastic_trunk/Tools: camilla_paper1_plots.r (+13 -12)

cje012 2019-09-12 08:47 Rev.: 8556

Changes to axis titles in fig E

7 lines of code changed in 1 file:

• hormones_v2/stochastic_trunk/Tools: camilla_paper1_plots.r (+7 -5)

cje012 2019-09-03 09:35 Rev.: 8535

Mostly cosmetic but important changes to all figures.

120 lines of code changed in 1 file:

• hormones_v2/stochastic_trunk/Tools: camilla_paper1_plots.r (+120 -96)

cje012 2019-08-16 07:54 Rev.: 8520

Added data for the whole population to the background of the plots in Figure F

23 lines of code changed in 1 file:

• hormones_v2/stochastic_trunk/Tools: camilla_paper1_plots.r (+23 -13)

cje012 2019-08-13 08:05 Rev.: 8519

Changed surplus available before growth into energy surplus in all figures.

5 lines of code changed in 1 file:

• hormones_v2/stochastic_trunk/Tools: camilla_paper1_plots.r (+5 -5)

cje012 2019-08-06 08:04 Rev.: 8517

Changed environmental axis on all figures.

10 lines of code changed in 1 file:

• hormones_v2/stochastic_trunk/Tools: camilla_paper1_plots.r (+10 -10)

cje012 2019-08-06 07:41 Rev.: 8516

FigureG: a is now a plot of environment given time, while b is surplus before growth given environment, c is reserves given environment and d is growth given environment.

12 lines of code changed in 1 file:

• hormones_v2/stochastic_trunk/Tools: camilla_paper1_plots.r (+12 -6)

cje012 2019-08-05 13:35 Rev.: 8515

Changed part of the lile in FigureB1 to be dottet, and rearanged the plot order in FigureE.

10 lines of code changed in 1 file:

• hormones_v2/stochastic_trunk/Tools: camilla_paper1_plots.r (+10 -9)

cje012 2019-08-02 15:23 Rev.: 8514

Added figure G

87 lines of code changed in 1 file:

• hormones_v2/stochastic_trunk/Tools: camilla_paper1_plots.r (+87 -1)

cje012 2019-06-28 09:18 Rev.: 8479

Minor change

1 lines of code changed in 1 file:

• hormones_v2/stochastic_trunk/Tools: camilla_paper1_plots.r (+1 -1)

cje012 2019-06-20 13:28 Rev.: 8454

Minor change to figure C

1 lines of code changed in 1 file:

• hormones_v2/stochastic_trunk/Tools: camilla_paper1_plots.r (+1 -1)

cje012 2019-06-17 11:08 Rev.: 8445

Renamed total lifetime mortality rate, to accumulated mortality risk.

2 lines of code changed in 1 file:

• hormones_v2/stochastic_trunk/Tools: camilla_paper1_plots.r (+2 -2)

cje012 2019-05-03 12:01 Rev.: 8223

Change to scale in figure C2

3 lines of code changed in 1 file:

• hormones_v2/stochastic_trunk/Tools: camilla_paper1_plots.r (+3 -3)

cje012 2019-05-02 13:35 Rev.: 8221

Minor change

2 lines of code changed in 1 file:

• hormones_v2/stochastic_trunk/Tools: camilla_paper1_plots.r (+2 -2)

cje012 2019-04-23 08:48 Rev.: 8142

Changes to locations for files and some updates to plots.

21 lines of code changed in 1 file:

• hormones_v2/stochastic_trunk/Tools: camilla_paper1_plots.r (+21 -22)

cje012 2019-04-23 06:45 Rev.: 8141

Minor change

2 lines of code changed in 1 file:

• hormones_v2/stochastic_trunk/Tools: plotting.r (+2 -2)

cje012 2019-02-22 11:27 Rev.: 7954

Made changes to some mortality plots so they now use 1-surival on the y-axis.

42 lines of code changed in 1 file:

• hormones_v2/stochastic_trunk/Tools: camilla_paper1_plots.r (+42 -36)

cje012 2019-02-08 08:25 Rev.: 7819

Replaced tabs with spaces.

44 lines of code changed in 1 file:

• hormones_v2/stochastic_trunk/Tools: plotting.r (+44 -25)

cje012 2019-01-30 11:26 Rev.: 7724

Changed to be more memory efficient.

29 lines of code changed in 1 file:

• hormones_v2/stochastic_trunk/Tools: plotting.r (+29 -21)

cje012 2019-01-24 14:53 Rev.: 7699

Minor changes

9 lines of code changed in 1 file:

• hormones_v2/stochastic_trunk/Tools: camilla_paper1_plots.r (+9 -9)

cje012 2019-01-08 16:04 Rev.: 7626

Many changes from the last commit. Axis titles are changes, some figures have had minor tweaks while others have had major tweaks. Changes made according to figure meeting today.

138 lines of code changed in 1 file:

• hormones_v2/stochastic_trunk/Tools: camilla_paper1_plots.r (+138 -140)

cje012 2019-01-08 07:16 Rev.: 7619

Added a way to calculate the different quantile individuals in the population based on when they finished growing up.

76 lines of code changed in 1 file:

• hormones_v2/stochastic_trunk/Tools: camilla_paper1_plots.r (+76 -43)

cje012 2019-01-03 13:55 Rev.: 7602

Added old figure B as figure F.

99 lines of code changed in 1 file:

• hormones_v2/stochastic_trunk/Tools: camilla_paper1_plots.r (+99 -5)

cje012 2019-01-03 10:21 Rev.: 7601

Added mortality plots to figure B

44 lines of code changed in 1 file:

• hormones_v2/stochastic_trunk/Tools: camilla_paper1_plots.r (+44 -7)

cje012 2018-12-20 15:15 Rev.: 7595

Changed line colour in figureE from red to black.

3 lines of code changed in 1 file:

• hormones_v2/stochastic_trunk/Tools: camilla_paper1_plots.r (+3 -3)

cje012 2018-12-20 14:47 Rev.: 7594

Changed a lot with figureB and some other more minor changes to the other plots.

204 lines of code changed in 1 file:

• hormones_v2/stochastic_trunk/Tools: camilla_paper1_plots.r (+204 -189)

cje012 2018-12-18 14:36 Rev.: 7587

A lot of changes to the plots, figure B is now completly changed.

235 lines of code changed in 1 file:

• hormones_v2/stochastic_trunk/Tools: camilla_paper1_plots.r (+235 -86)

cje012 2018-12-05 06:38 Rev.: 7569

Made some changes to figure 1 and 2.

33 lines of code changed in 1 file:

• hormones_v2/stochastic_trunk/Tools: camilla_paper1_plots.r (+33 -18)

cje012 2018-12-03 08:28 Rev.: 7564

Fixed a bug in some plots where points wih R_cat < 1 appared grey instead of black.

3 lines of code changed in 1 file:

• hormones_v2/stochastic_trunk/Tools: plotting.r (+3 -3)

cje012 2018-10-22 10:44 Rev.: 7454

Fixed error in plot C1: It only had 4 x axis ticks, but this is now changed to 5 like the other plots.

2 lines of code changed in 1 file:

• hormones_v2/stochastic_trunk/Tools: camilla_paper1_plots.r (+2 -1)

cje012 2018-10-22 10:21 Rev.: 7453

Changed the scale for the environment from 0-1, to the scale for ValueOfE. Scales with the max and minimim values from the ValueOfE binary file from the Hormone model.

67 lines of code changed in 1 file:

• hormones_v2/stochastic_trunk/Tools: camilla_paper1_plots.r (+67 -28)

cje012 2018-10-19 09:07 Rev.: 7445

Minor change to two plots.

3 lines of code changed in 1 file:

• hormones_v2/stochastic_trunk/Tools: plotting.r (+3 -3)

cje012 2018-10-15 14:24 Rev.: 7425

Added new plot with 4 plots: 1. O2~Environment 2. O2~environment & THF, 3. O2 mortality~environment & THF, 4. THF~environment & R_cat

14 lines of code changed in 1 file:

• hormones_v2/stochastic_trunk/Tools: plotting.r (+14 -3)

cje012 2018-09-24 09:35 Rev.: 7350

minor change

1 lines of code changed in 1 file:

• hormones_v2/stochastic_trunk/Tools: camilla_paper1_plots.r (+1 -1)

cje012 2018-09-17 14:03 Rev.: 7328

Minor cosmetic changes.

3 lines of code changed in 1 file:

• hormones_v2/stochastic_trunk/Tools: camilla_paper1_plots.r (+3 -3)

cje012 2018-09-17 12:34 Rev.: 7327

Changed plot B so lines that indicate mean now are added to the end of the plot, with a x-axis tick indicating that these are mean values.

9 lines of code changed in 1 file:

• hormones_v2/stochastic_trunk/Tools: camilla_paper1_plots.r (+9 -7)

cje012 2018-09-17 09:21 Rev.: 7326

Minor cosmetic changes to plots, most notably Figure D now has a point for every timestep except the last one which is an arrow.

11 lines of code changed in 1 file:

• hormones_v2/stochastic_trunk/Tools: camilla_paper1_plots.r (+11 -7)

cje012 2018-09-11 08:54 Rev.: 7314

Minor change to file sources.

1 lines of code changed in 1 file:

• hormones_v2/stochastic_trunk/Tools: camilla_paper1_plots.r (+1 -1)

cje012 2018-08-09 14:02 Rev.: 7296

Completly reworked Figure D.

77 lines of code changed in 1 file:

• hormones_v2/stochastic_trunk/Tools: camilla_paper1_plots.r (+77 -27)

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