Tools
(5 files, 3303 lines)
[root]/hormones_v2/branches_camilla/parasitebranch_v1
Tools
(5 files, 3303 lines)
| Author | Changes | Lines of Code | Lines per Change |
|---|---|---|---|
| cje012 | 64 (100.0%) | 5057 (100.0%) | 79.0 |
Cleaning up my mess
386 lines of code changed in 1 file:
Minor but important update.
5 lines of code changed in 3 files:
Removed settings for double precision
2 lines of code changed in 1 file:
Changed the calculations of starvation to survival = survival * (1/starvation_limit) * (reserves/reserves_max)
5 lines of code changed in 3 files:
Added forward only model version for experiments where one can change both parasite expoitation rate and food availiability, while switching between several optimalisation tables.
518 lines of code changed in 1 file:
Updated to also include runpve to run model forward only with differeing parasite virulence and food availiability.
29 lines of code changed in 1 file:
Increased the resulution between the parasite virulence steps.
1 lines of code changed in 1 file:
Commented out starvation_limit
2 lines of code changed in 1 file:
Fixed error in saving to the ind_pv_summary_individual array, as well as uncommented lines concerning starvation_limit
4 lines of code changed in 1 file:
Model that runs forward only with differeing levels of parasite virulence, from 0-1, with 0.05 steps
530 lines of code changed in 1 file:
Updated to also include runpv to run model forward only with differeing parasite virulence
38 lines of code changed in 1 file:
Fixed bug
2 lines of code changed in 2 files:
Fixed bug that caused negative survival if starvation limit was turned on.
4 lines of code changed in 2 files:
Changed environmental values to fit the new ValueOfE scale.
2 lines of code changed in 1 file:
Fixed error in makefile
15 lines of code changed in 1 file:
Added propset to the file
2 lines of code changed in 1 file:
Version of the model to run experiments by forcing indivduals through preset environmens.
699 lines of code changed in 1 file:
Updated to reflect changes in the other versions of the model
23 lines of code changed in 1 file:
Fixed error where initial R_cat was saved incorrecly to the ind.array.
5 lines of code changed in 1 file:
Updated to new parameters.
2 lines of code changed in 1 file:
Uncommented starvation limit in code, remember to set the starvation parameter to -1000 to not have it in use.
4 lines of code changed in 1 file:
Updated to new parameters.
17 lines of code changed in 1 file:
Updated to the version in the binary_IO trunk with some small tweaks so it will work with the hormone model.
215 lines of code changed in 1 file:
Updated the parameters.
2 lines of code changed in 1 file:
Changed OXF_inc to 1._RP+(2._RP/3._RP), so new OXF_max is 2500
1 lines of code changed in 1 file:
Replaced tabs with spaces.
14 lines of code changed in 1 file:
Added OXFmax_inc = 1.6 to parameterfile.
19 lines of code changed in 1 file:
Minor change
1 lines of code changed in 1 file:
Changed to reflect the changes to the main hormone model, with the possibility to increas the O2max.
6 lines of code changed in 1 file:
Fixed error in how R_cat is saved to the ind array.
1 lines of code changed in 1 file:
Commented out lines about starvation_limit as they cause problems.
4 lines of code changed in 1 file:
Another bugfix..
1 lines of code changed in 1 file:
Minor change to code
1 lines of code changed in 1 file:
Fixed error introduced in last commit: Environment for t=1 was not saved.
2 lines of code changed in 1 file:
Fixed bug in the code, E_real was never updated in the initiation of the environment in the last version of the model.
4 lines of code changed in 1 file:
Reverted to last version.
6 lines of code changed in 1 file:
Another try at making the environmtns that the individuals move in predictable. An array that contains the environment for every individual for every timestep is now calculated before the forward iteration in the model.
30 lines of code changed in 1 file:
Trying to add a fixed seed to every individual.
33 lines of code changed in 2 files:
Added svn tags to files.
11 lines of code changed in 6 files:
Rewrote how parasite costs are calculated, they are now dependent on SMR_somatic_std instead of intake as before.
3 lines of code changed in 1 file:
(5 more)