[root]/branches/judy/squirrel
misc
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Dec16_preMSmod
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outputs_Darwin
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MODEL_SNG-i386.dSYM
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Contents
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Resources
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DWARF
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pick 5 2015.11.26
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preJarlcleanup
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| Author | Changes | Lines of Code | Lines per Change |
|---|---|---|---|
| Totals | 238 (100.0%) | 37706 (100.0%) | 158.4 |
| judyjinn | 219 (92.0%) | 34740 (92.1%) | 158.6 |
| rdi003 | 10 (4.2%) | 2966 (7.9%) | 296.6 |
| sbu062 | 9 (3.8%) | 0 (0.0%) | 0.0 |
branch long obsolete
0 lines of code changed in 9 files:
commit before converting all cog/forage genes into a single genomeCOG and genomeFOR array
254 lines of code changed in 2 files:
implemented starting weight dependent on mom's weight in SR diploideggs14 and also at the start of SRlifecycle
18 lines of code changed in 1 file:
finished adding new gene for controlling trigger of GOS 3, genomerlxexplor
104 lines of code changed in 2 files:
added relax/explore gene to commonsquirrel
30 lines of code changed in 1 file:
adding a gene for relax/explore in setupfile and in HED24
2 lines of code changed in 1 file:
no changes
15 lines of code changed in 1 file:
added back CommonSquirrel
22 lines of code changed in 1 file:
trying to fix conflict/out dated error in svn. copy pasted all the files again
0 lines of code changed in 1 file:
fixed error in stay_risk equation. Changed next_loc to curr_loc. Reduced bud replenish rate. changed stay risk beta from 20 to 10. Turned memory gene back on for foodmem decay
19 lines of code changed in 3 files:
Changed weight gain to be at the end of every day instead of at the end of the simulation.
195 lines of code changed in 2 files:
fixed the acorn_eff. Was too high at fisrst
4 lines of code changed in 1 file:
trying out removal of acorn replenishing
11 lines of code changed in 1 file:
changed replen rate for buds, forage success rate of acorns, kcals of buds. Squirrels only gain weight at the end of a day now. added a totkcals for acorns/buds in common squirrel. Change the calculation of final weight to be based on what weight squirrels had gained over 10 days
80 lines of code changed in 2 files:
Changing entire program to be 10 days long. Increased eating speed of acorns, decreased replenishing rate of buds to 0.005, changed acorn finding success rate
12 lines of code changed in 1 file:
commit before changing from 10months to 1 week time frame
4 lines of code changed in 1 file:
messed up my branch, readding files and deleting misc
209 lines of code changed in 1 file:
fixed the unable to restart from restart.txt file problem
696 lines of code changed in 2 files:
Finally got the numinds array updating correctly. Now counts only living individuals
41 lines of code changed in 1 file:
reverted back to regular numinds counting
5 lines of code changed in 1 file:
added correct common block file and the msic folder
396 lines of code changed in 1 file:
deleted the two HED files that were unused
127 lines of code changed in 1 file:
Finished removing all extarneous txt files
658 lines of code changed in 1 file:
first commit of day, added SR to calculate summaries at the end of each generation with average numinds per location. Last commit before removing extraneous txt files
151 lines of code changed in 1 file:
first commit of the day. Everything running
146 lines of code changed in 2 files:
first commit of the day. added a CSV for avggene and sd gene
227 lines of code changed in 1 file:
changed the move risk NR so it reflects branches with different difficulties more accurately
38 lines of code changed in 2 files:
working on getting the code going with added predNR in hunger response
225 lines of code changed in 3 files:
Fixed a wrong variable in SRpredmort for call SRground_vis. Also changed the predator attack section to be a little higher
64 lines of code changed in 2 files:
now 4 levels, reduced SRreplen rate for buds, added height as a factor for predation risk.
12 lines of code changed in 2 files:
fixed the misaligned mult array problem i had earlier which happened when i removed the NRs
58 lines of code changed in 2 files:
changed the numbudsBAS equation in SRnumBAS so it can be flexibly changed for each level of the tree
25 lines of code changed in 2 files:
adding acorns/buds seen as a hunger appraisal. Removed acorn forage attempts and stay risk from hunger response. changed popdyn prints to csv
151 lines of code changed in 2 files:
Beginning to test altering the NRs by adding and removing. This is the last commit of the original set up files with all NRS turned on with 34 tot NRs used
15 lines of code changed in 1 file:
changed the max percept txt file to a csv output
58 lines of code changed in 1 file:
Fixed a NowMaxPercept error where the wrong value was being passed to #14
29 lines of code changed in 1 file:
changed the boost2 conditions to be dependent on fpop size, not just a number
1 lines of code changed in 1 file:
first commit of the morn.
2 lines of code changed in 1 file:
fixed the gen 101 problem. had forgotten to pass on the myacorn data and also moved the avgbud/acorn outside of the loop so it would calculate correctly
68 lines of code changed in 1 file:
Code is up and running
2 lines of code changed in 1 file:
(90 more)