Directory branches/budaev/STOMACH/dox/

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sbu062 2022-09-23 11:05 Rev.: 12802

doc: added screenshot

0 lines of code changed in 1 file:

• branches/budaev/STOMACH/dox: img_scr_fishmet_envvarserv.png (new)

sbu062 2022-09-23 08:57 Rev.: 12801

doc: small changes on output destination

3 lines of code changed in 2 files:

• branches/budaev/STOMACH/dox: doc_environ_vars.adoc (+2 -1), doc_opts_propts.adoc (+1)

sbu062 2022-09-22 13:42 Rev.: 12795

doc: document `output_dest` and `FFA_MODEL_OUTPUT_DEST`

33 lines of code changed in 2 files:

• branches/budaev/STOMACH/dox: doc_environ_vars.adoc (+9), doc_opts_propts.adoc (+24)

sbu062 2022-09-20 11:35 Rev.: 12782

doc: notes on DISLIN install on Linux

16 lines of code changed in 1 file:

• branches/budaev/STOMACH/dox: doc_appx_install.adoc (+16)

sbu062 2022-09-20 11:29 Rev.: 12781

doc: document how to fix dislin.mod error
{{{
Fatal Error: Cannot read module file ‘/usr/local/dislin/gf/real64/dislin.mod’
opened at (1), because it was created by a different version of GNU Fortran
compilation terminated.
}}}

41 lines of code changed in 1 file:

• branches/budaev/STOMACH/dox: doc_appx_install.adoc (+41 -1)

sbu062 2022-09-14 14:28 Rev.: 12755

doc: fixes

1 lines of code changed in 1 file:

• branches/budaev/STOMACH/dox: doc_opts_model.adoc (+1 -1)

sbu062 2022-09-14 13:35 Rev.: 12747

doc: more fixes; forgotten new functionality

4 lines of code changed in 1 file:

• branches/budaev/STOMACH/dox: doc_commands.adoc (+4 -1)

sbu062 2022-09-14 13:14 Rev.: 12746

doc: document adjustment of stomach transport matrix for fish body size and temperature

37 lines of code changed in 3 files:

• branches/budaev/STOMACH/dox: doc_commands.adoc (+2), doc_opts_model.adoc (+10), doc_opts_propts.adoc (+25)

sbu062 2022-09-06 07:52 Rev.: 12701

need new line for long examples

1 lines of code changed in 1 file:

• branches/budaev/STOMACH/dox: doc_opts_model.adoc (+1 -1)

sbu062 2022-09-06 06:47 Rev.: 12700

document r12697 autodetect stomach transport

11 lines of code changed in 1 file:

• branches/budaev/STOMACH/dox: doc_opts_model.adoc (+11 -5)

sbu062 2022-07-04 10:46 Rev.: 12649

added parameter for `appetite_night` in (fish_appetite_probability_ingestion)

7 lines of code changed in 1 file:

• branches/budaev/STOMACH/dox: doc_opts_model.adoc (+7)

sbu062 2022-06-28 13:00 Rev.: 12646

need crop

0 lines of code changed in 1 file:

• branches/budaev/STOMACH/dox: img_scr_rerun_fish_object2.png (changed)

sbu062 2022-06-28 12:37 Rev.: 12644

added gui screenshot for fish object save/load function

0 lines of code changed in 1 file:

• branches/budaev/STOMACH/dox: img_scr_rerun_fish_object2.png (new)

sbu062 2022-06-28 11:09 Rev.: 12642

add screenshot for restart with fish object save load

2 lines of code changed in 3 files:

• branches/budaev/STOMACH/dox: doc_commands.adoc (+1), doc_opts_propts.adoc (+1), img_scr_rerun_fish_object.png (new)

sbu062 2022-06-28 07:32 Rev.: 12640

doc: document fish object data functionality

18 lines of code changed in 2 files:

• branches/budaev/STOMACH/dox: doc_commands.adoc (+11), doc_opts_propts.adoc (+7)

sbu062 2022-06-03 20:15 Rev.: 12550

main configuration file can be set using the environment variable: `FFA_MODEL_PARAMETER_FILE`

11 lines of code changed in 2 files:

• branches/budaev/STOMACH/dox: doc_environ_vars.adoc (+7), doc_opts_model.adoc (+4 -3)

sbu062 2022-06-01 20:52 Rev.: 12547

doc: documented `day_starts_hour`

8 lines of code changed in 1 file:

• branches/budaev/STOMACH/dox: doc_opts_model.adoc (+8 -1)

sbu062 2022-05-30 11:14 Rev.: 12528

parameters file name is now `cfg` extension: **parameters.cfg**
This makes it much easier to work with the file, as syntax highlighting is almost everywhere automatic

4 lines of code changed in 2 files:

• branches/budaev/STOMACH/dox: draw-main-comps.dot (+3 -3), draw-manual-dep.dot (+1 -1)

sbu062 2022-04-08 22:49 Rev.: 12391

doc: start documenting activity and AMR

12 lines of code changed in 1 file:

• branches/budaev/STOMACH/dox: doc_opts_model.adoc (+12)

sbu062 2022-04-04 11:25 Rev.: 12330

doc: intro updated, new ref

9 lines of code changed in 1 file:

• branches/budaev/STOMACH/dox: manual.bib (+9)

sbu062 2022-03-31 12:21 Rev.: 12320

doc: fix merge example script

7 lines of code changed in 1 file:

• branches/budaev/STOMACH/dox: sensitivity_generate.py (+7 -6)

sbu062 2022-03-30 18:30 Rev.: 12317

doc: merge from origin

1 lines of code changed in 1 file:

• branches/budaev/STOMACH/dox: sensitivity_generate.py (+1)

sbu062 2022-03-30 18:18 Rev.: 12315

doc: sensitivity analysis batch script, needs a separate copy for example doc (appendix)

140 lines of code changed in 1 file:

• branches/budaev/STOMACH/dox: sensitivity_generate.py (new 140)

sbu062 2022-03-30 12:20 Rev.: 12312

doc: more info on batch operation

1 lines of code changed in 1 file:

• branches/budaev/STOMACH/dox: doc_commands.adoc (+1)

sbu062 2022-03-30 11:12 Rev.: 12309

doc: appendix 2 is fishmet command script with usage; appendix tags do not need numbered to avoid wrong reference errors tagging in main text

2 lines of code changed in 1 file:

• branches/budaev/STOMACH/dox: doc_appx_install.adoc (+2 -3)

sbu062 2022-03-29 13:47 Rev.: 12303

silent mode illogical, use only batch

3 lines of code changed in 1 file:

• branches/budaev/STOMACH/dox: doc_cmd_opts.adoc (+3 -4)

sbu062 2022-03-29 10:55 Rev.: 12302

batch mode (`--batch`) forces CMD mode, no GUI

2 lines of code changed in 1 file:

• branches/budaev/STOMACH/dox: doc_cmd_opts.adoc (+2 -1)

sbu062 2022-03-29 09:29 Rev.: 12301

doc: batch mode

9 lines of code changed in 1 file:

• branches/budaev/STOMACH/dox: doc_cmd_opts.adoc (+9 -1)

sbu062 2022-03-24 11:49 Rev.: 12266

doc: no more volume ml as of e.g. r11508

2 lines of code changed in 1 file:

• branches/budaev/STOMACH/dox: doc_opts_model.adoc (+2 -2)

sbu062 2022-02-11 11:36 Rev.: 12166

added comment with `bc` function

5 lines of code changed in 1 file:

• branches/budaev/STOMACH/dox: doc_ddpi_decay.adoc (+5)

sbu062 2022-02-11 10:56 Rev.: 12165

fix latex formula variable: decay constant must use consistent symbol

2 lines of code changed in 1 file:

• branches/budaev/STOMACH/dox: doc_ddpi_decay.adoc (+2 -2)

sbu062 2021-11-26 07:37 Rev.: 11832

doc: `rate_unit_scale` description

5 lines of code changed in 1 file:

• branches/budaev/STOMACH/dox: doc_opts_propts.adoc (+5)

sbu062 2021-11-24 22:26 Rev.: 11825

doc: help doc on specific growth rate

1 lines of code changed in 1 file:

• branches/budaev/STOMACH/dox: doc_commands.adoc (+1)

sbu062 2021-11-16 10:29 Rev.: 11808

doc: default value of `stats_output_long`

2 lines of code changed in 1 file:

• branches/budaev/STOMACH/dox: doc_opts_propts.adoc (+2 -1)

sbu062 2021-11-16 09:59 Rev.: 11807

implemented long and short output stats file format controlled by `stats_output_long` configuration parameter

33 lines of code changed in 2 files:

• branches/budaev/STOMACH/dox: doc_opts_model.adoc (-24), doc_opts_propts.adoc (+33)

sbu062 2021-11-11 11:32 Rev.: 11796

doc: added GUI screenshot

0 lines of code changed in 1 file:

• branches/budaev/STOMACH/dox: img_scr_dat2_gui.png (new)

sbu062 2021-11-11 11:04 Rev.: 11795

doc: additional notes on `outout` and `append`commands

2 lines of code changed in 2 files:

• branches/budaev/STOMACH/dox: doc_commands.adoc (+2), img_scr_dat1_output.png (new)

sbu062 2021-11-10 22:06 Rev.: 11792

doc: more text on data saving

1 lines of code changed in 1 file:

• branches/budaev/STOMACH/dox: doc_commands.adoc (+1)

sbu062 2021-11-10 20:11 Rev.: 11790

doc: added `output stats` and `append stats` to manual

22 lines of code changed in 2 files:

• branches/budaev/STOMACH/dox: doc_commands.adoc (+15), doc_opts_model.adoc (+7)

sbu062 2021-11-04 18:44 Rev.: 11757

doc: plot commands explained

18 lines of code changed in 1 file:

• branches/budaev/STOMACH/dox: doc_commands.adoc (+18 -17)

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